Package org.anchoranalysis.image.bean.provider.stack

Class Arrange

Object

AnchorBean<StackProvider>

InitializableBean<StackProvider,ImageInitialization>

ImageBean<StackProvider>

BeanProviderAsStackBase<StackProvider,Stack>

StackProvider

Arrange

All Implemented Interfaces:

Provider<Stack>, ProviderAsStack

public class Arrange
extends StackProvider

Creates a stack that combines other stacks.

The stacks to be combined are specified in list.

Instructions on how to combine the stacks are specified in arrange, relative to the order of the elements of list.

Author:

Owen Feehan

Constructor Summary

Constructors

Constructor	Description
Arrange()
Arrange(boolean createShort, boolean forceRGB)	Shortcut to create with some explicit parameters.

Method Summary

Modifier and Type	Method	Description
void	addStack(Provider<Stack> provider)	Adds a stack to the existing list of stack-providers.
Stack	get()	Gets or creates an object of type T.
StackArranger	getArrange()	Determines how the stacks in list are arranged.
Interpolator	getInterpolator()	The interpolator to use for scaling images, if needed.
List<Provider<Stack>>	getList()	The stacks that are passed in respect order into arrange.
boolean	isCreateShort()	If true, the created raster has unsigned short voxel data type.
boolean	isForceRGB()	Iff true, ensures every stack is converted into 3 channels.
void	setArrange(StackArranger arrange)	Determines how the stacks in list are arranged.
void	setCreateShort(boolean createShort)	If true, the created raster has unsigned short voxel data type.
void	setForceRGB(boolean forceRGB)	Iff true, ensures every stack is converted into 3 channels.
void	setInterpolator(Interpolator interpolator)	The interpolator to use for scaling images, if needed.
void	setList(List<Provider<Stack>> list)	The stacks that are passed in respect order into arrange.

Methods inherited from class org.anchoranalysis.image.bean.provider.stack.StackProvider

getAsStack

Methods inherited from class org.anchoranalysis.bean.initializable.InitializableBean

getInitialization, getLogger, getPropertyInitializer, initialize, initializeRecursive, initRecursiveWithInitializer, isInitialized, onInitialization

Methods inherited from class org.anchoranalysis.bean.AnchorBean

checkMisconfigured, describeBean, describeChildren, duplicateBean, fields, findFieldsOfClass, getBeanName, getLocalPath, localise, toString

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Details

Arrange

public Arrange(boolean createShort,
 boolean forceRGB)

Shortcut to create with some explicit parameters.

Parameters:

createShort - if true, the created raster has unsigned short voxel data type. If false, then unsigned byte.

forceRGB - iff true, ensures every stack is converted into 3 channels.

Arrange

public Arrange()

Method Details

addStack

public void addStack(Provider<Stack> provider)

Adds a stack to the existing list of stack-providers.

Parameters:

provider - the provider of the stack to add.

get

public Stack get()
          throws ProvisionFailedException

Description copied from interface: Provider

Gets or creates an object of type T.

Returns:

the object returned by the provider.

Throws:

ProvisionFailedException - if the object cannot be returned.

getList

public List<Provider<Stack>> getList()

The stacks that are passed in respect order into arrange.

setList

public void setList(List<Provider<Stack>> list)

The stacks that are passed in respect order into arrange.

getArrange

public StackArranger getArrange()

Determines how the stacks in list are arranged.

setArrange

public void setArrange(StackArranger arrange)

Determines how the stacks in list are arranged.

isForceRGB

public boolean isForceRGB()

Iff true, ensures every stack is converted into 3 channels.

setForceRGB

public void setForceRGB(boolean forceRGB)

Iff true, ensures every stack is converted into 3 channels.

isCreateShort

public boolean isCreateShort()

If true, the created raster has unsigned short voxel data type. If false, then unsigned byte.

setCreateShort

public void setCreateShort(boolean createShort)

If true, the created raster has unsigned short voxel data type. If false, then unsigned byte.

getInterpolator

public Interpolator getInterpolator()

The interpolator to use for scaling images, if needed.

setInterpolator

public void setInterpolator(Interpolator interpolator)

The interpolator to use for scaling images, if needed.