Package | Description |
---|---|
org.anchoranalysis.image.inference.segment |
Non-beans pertaining to segmentation of images via model inference.
|
org.anchoranalysis.image.io.object.output.rgb |
Writing an
ObjectCollection to the filesystem as
RGB raster-images. |
org.anchoranalysis.overlay.bean |
Beans relating to drawing an
Overlay on an image. |
org.anchoranalysis.plugin.mpp.experiment.bean.objects.columndefinition |
Defining columns used in
ExportObjectsFromCSV . |
org.anchoranalysis.plugin.mpp.experiment.objects.csv |
Reading rows from a CSV file.
|
Modifier and Type | Method and Description |
---|---|
ObjectCollectionWithProperties |
SegmentedObjectsAtScale.objectsWithProperties()
Like
SegmentedObjectsAtScale.objects() but instead creates a ObjectCollectionWithProperties
containing empty properties. |
Modifier and Type | Method and Description |
---|---|
protected ObjectCollectionWithProperties |
DrawObjectsGenerator.generateMasks(ObjectCollectionWithProperties objects) |
protected ObjectCollectionWithProperties |
DrawCroppedObjectsGenerator.generateMasks(ObjectCollectionWithProperties objects) |
protected abstract ObjectCollectionWithProperties |
ObjectsAsRGBGenerator.generateMasks(ObjectCollectionWithProperties objects)
Creates a
ObjectCollectionWithProperties indicative of the masks that will be imposed
on top of the background-region. |
Modifier and Type | Method and Description |
---|---|
protected RGBStack |
DrawObjectsGenerator.generateBackgroundRegion(ObjectCollectionWithProperties objects,
io.vavr.control.Either<Dimensions,DisplayStack> background) |
protected RGBStack |
DrawCroppedObjectsGenerator.generateBackgroundRegion(ObjectCollectionWithProperties objects,
io.vavr.control.Either<Dimensions,DisplayStack> background) |
protected abstract RGBStack |
ObjectsAsRGBGenerator.generateBackgroundRegion(ObjectCollectionWithProperties objects,
io.vavr.control.Either<Dimensions,DisplayStack> background)
Creates a
RGBStack containing the background, without objects being drawn upon it. |
protected ObjectCollectionWithProperties |
DrawObjectsGenerator.generateMasks(ObjectCollectionWithProperties objects) |
protected ObjectCollectionWithProperties |
DrawCroppedObjectsGenerator.generateMasks(ObjectCollectionWithProperties objects) |
protected abstract ObjectCollectionWithProperties |
ObjectsAsRGBGenerator.generateMasks(ObjectCollectionWithProperties objects)
Creates a
ObjectCollectionWithProperties indicative of the masks that will be imposed
on top of the background-region. |
Stack |
ObjectsAsRGBGenerator.transform(ObjectCollectionWithProperties element) |
Modifier and Type | Method and Description |
---|---|
void |
DrawObject.drawCollection(ObjectCollectionWithProperties objects,
RGBStack stack,
ObjectDrawAttributes attributes)
Writes object-masks onto of a
RGBStack - across all of the stack. |
void |
DrawObject.drawCollection(ObjectCollectionWithProperties objects,
RGBStack stack,
ObjectDrawAttributes attributes,
BoundingBox boxContainer)
Writes object-masks onto of a
RGBStack - within a bounding box only. |
Modifier and Type | Method and Description |
---|---|
ObjectCollectionWithProperties |
Pairwise.findObjectsMatchingRow(CSVRow csvRow,
IntersectingObjects<ObjectMask> allObjects) |
abstract ObjectCollectionWithProperties |
ColumnDefinition.findObjectsMatchingRow(CSVRow csvRow,
IntersectingObjects<ObjectMask> allObjects) |
ObjectCollectionWithProperties |
Single.findObjectsMatchingRow(CSVRow csvRow,
IntersectingObjects<ObjectMask> allObjects) |
Modifier and Type | Method and Description |
---|---|
ObjectCollectionWithProperties |
CSVRow.findObjectsMatchingRow(IntersectingObjects<ObjectMask> allObjects) |
Copyright © 2010–2023 Owen Feehan, ETH Zurich, University of Zurich, Hoffmann-La Roche. All rights reserved.