Package org.anchoranalysis.image.io.object.output.grayscale

Class ObjectsMergedAsMaskGenerator

Object

RasterGenerator<ObjectCollection>

RasterGeneratorSelectFormat<ObjectCollection>

ObjectsAsGrayscaleGenerator

ObjectsMergedAsMaskGenerator

All Implemented Interfaces:

Generator<ObjectCollection>, TransformingGenerator<ObjectCollection,Stack>, ElementWriter<ObjectCollection>

public class ObjectsMergedAsMaskGenerator
extends ObjectsAsGrayscaleGenerator

Writes objects merged together as a mask.

Author:

Owen Feehan

Constructor Summary

Constructors

Constructor	Description
ObjectsMergedAsMaskGenerator(Dimensions dimensions)	Create with particular size for the mask image.

Method Summary

Modifier and Type	Method	Description
Stack	transform(ObjectCollection element)	Applies any necessary preprocessing to create an element suitable for writing to the filesystem.

Methods inherited from class org.anchoranalysis.image.io.object.output.grayscale.ObjectsAsGrayscaleGenerator

dimensions, guaranteedImageAttributes

Methods inherited from class org.anchoranalysis.image.io.stack.output.generator.RasterGeneratorSelectFormat

selectFileExtension, writeToFile

Methods inherited from class org.anchoranalysis.image.io.stack.output.generator.RasterGenerator

write, writeWithIndex

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Details

ObjectsMergedAsMaskGenerator

public ObjectsMergedAsMaskGenerator(Dimensions dimensions)

Create with particular size for the mask image.

Parameters:

dimensions - the Dimensions of the image in which the mask should be created (sufficiently large to contain any possible merged objects).

Method Details

transform

public Stack transform(ObjectCollection element)
                throws OutputWriteFailedException

Description copied from interface: TransformingGenerator

Applies any necessary preprocessing to create an element suitable for writing to the filesystem.

Parameters:

element - element to be assigned and then transformed.

Returns:

the transformed element after necessary preprocessing.

Throws:

OutputWriteFailedException - if anything goes wrong.