Package | Description |
---|---|
org.anchoranalysis.io.input.bean.files |
Methods to provide a collection of
File s. |
org.anchoranalysis.plugin.annotation.bean.file |
FilesProvider s for providing annotations. |
org.anchoranalysis.plugin.io.bean.file.provider |
Implementations of
FilesProvider . |
org.anchoranalysis.plugin.io.bean.input.files.provider |
Implementations of
FilesProvider . |
org.anchoranalysis.plugin.quick.bean.structure |
Specifying a structure of subdirectories and filenames when quickly defining an experiment.
|
Modifier and Type | Method and Description |
---|---|
List<File> |
SpecificPathList.create(InputManagerParameters parameters) |
abstract List<File> |
FilesProvider.create(InputManagerParameters parameters)
Creates or provides a list of files.
|
List<File> |
FilesProviderWithDirectory.create(InputManagerParameters parameters) |
List<File> |
FilesProviderUnary.create(InputManagerParameters parameters) |
List<File> |
FilesProviderWithDirectoryUnary.matchingFilesForDirectory(Path directory,
InputManagerParameters parameters) |
List<File> |
SearchDirectory.matchingFilesForDirectory(Path directory,
InputManagerParameters parameters) |
abstract List<File> |
FilesProviderWithDirectory.matchingFilesForDirectory(Path directory,
InputManagerParameters parameters)
The matching files for this provider that exist in a particular directory.
|
Optional<Path> |
SpecificPathList.rootDirectory(InputContextParameters inputContext) |
abstract Optional<Path> |
FilesProvider.rootDirectory(InputContextParameters inputContext)
A root directory for these files, if it exists.
|
Optional<Path> |
FilesProviderUnary.rootDirectory(InputContextParameters inputContext) |
protected abstract List<File> |
FilesProviderWithDirectoryUnary.transform(List<File> source)
Transform an existing collection of files.
|
protected abstract List<File> |
FilesProviderUnary.transform(List<File> source,
boolean debugMode)
Transform an existing collection of files.
|
Modifier and Type | Method and Description |
---|---|
List<File> |
FromAnnotations.create(InputManagerParameters parameters) |
Modifier and Type | Method and Description |
---|---|
List<File> |
Rooted.create(InputManagerParameters parameters) |
List<File> |
Combine.create(InputManagerParameters parameters) |
protected List<File> |
LimitWithDirectory.transform(List<File> source) |
protected List<File> |
SampleWithDirectory.transform(List<File> source) |
protected List<File> |
SortAlphabeticallyWithDirectory.transform(List<File> source) |
Modifier and Type | Method and Description |
---|---|
List<File> |
DirectoryDepth.matchingFilesForDirectory(Path directory,
InputManagerParameters parameters) |
protected List<File> |
FilterForExistingFiles.transform(List<File> source,
boolean debugMode) |
Modifier and Type | Method and Description |
---|---|
List<File> |
ExperimentResultsExperimentStructure.create(InputManagerParameters parameters) |
Copyright © 2010–2023 Owen Feehan, ETH Zurich, University of Zurich, Hoffmann-La Roche. All rights reserved.