Package org.anchoranalysis.plugin.annotation.bean.comparison.assigner

Class MaskIntersectionAssigner

Object

AnchorBean<AnnotationComparisonAssigner<ObjectVoxelIntersection>>

AnnotationComparisonAssigner<ObjectVoxelIntersection>

MaskIntersectionAssigner

public class MaskIntersectionAssigner
extends AnnotationComparisonAssigner<ObjectVoxelIntersection>

No outputs are produced.

Author:

Owen Feehan

Constructor Summary

Constructors

Constructor	Description
MaskIntersectionAssigner()

Method Summary

Modifier and Type	Method	Description
void	addDefaultOutputs(OutputEnabledMutable outputs)	Adds any default outputs that should occur from the assigner.
ObjectVoxelIntersection	createAssignment(ObjectsToCompare objectsToCompare, Dimensions dimensions, boolean useMIP, InputOutputContext context)	Creates an assignment based on the objects to compare.
ImageCounterWithStatistics<ObjectVoxelIntersection>	groupForKey(String key)	Gets the ImageCounterWithStatistics for a specific key.
boolean	moreThanOneObject()	Checks if more than one object can exist in the assignment.

Methods inherited from class org.anchoranalysis.bean.AnchorBean

checkMisconfigured, describeBean, describeChildren, duplicateBean, fields, findFieldsOfClass, getBeanName, getLocalPath, localise, toString

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Details

MaskIntersectionAssigner

public MaskIntersectionAssigner()

Method Details

createAssignment

public ObjectVoxelIntersection createAssignment(ObjectsToCompare objectsToCompare,
 Dimensions dimensions,
 boolean useMIP,
 InputOutputContext context)
                                         throws CreateException

Description copied from class: AnnotationComparisonAssigner

Creates an assignment based on the objects to compare.

Specified by:

createAssignment in class AnnotationComparisonAssigner<ObjectVoxelIntersection>

Parameters:

objectsToCompare - the objects to compare.

dimensions - the dimensions of the image.

useMIP - whether to use Maximum Intensity Projection.

context - the input-output context.

Returns:

the created assignment.

Throws:

CreateException - if the assignment cannot be created.

groupForKey

public ImageCounterWithStatistics<ObjectVoxelIntersection> groupForKey(String key)

Description copied from class: AnnotationComparisonAssigner

Gets the ImageCounterWithStatistics for a specific key.

Specified by:

groupForKey in class AnnotationComparisonAssigner<ObjectVoxelIntersection>

Parameters:

key - the key to get the group for.

Returns:

the ImageCounterWithStatistics for the given key.

moreThanOneObject

public boolean moreThanOneObject()

Description copied from class: AnnotationComparisonAssigner

Checks if more than one object can exist in the assignment.

Specified by:

moreThanOneObject in class AnnotationComparisonAssigner<ObjectVoxelIntersection>

Returns:

true if more than one object can exist, false otherwise.

addDefaultOutputs

public void addDefaultOutputs(OutputEnabledMutable outputs)

Description copied from class: AnnotationComparisonAssigner

Adds any default outputs that should occur from the assigner.

Specified by:

addDefaultOutputs in class AnnotationComparisonAssigner<ObjectVoxelIntersection>

Parameters:

outputs - the OutputEnabledMutable to add the default outputs to.