Package org.anchoranalysis.plugin.fiji.bean.channel.grayscalereconstruction

Class GrayscaleReconstruction2DIJ

Object

AnchorBean<GrayscaleReconstructionByErosion>

GrayscaleReconstructionByErosion

GrayscaleReconstruction2DIJ

public class GrayscaleReconstruction2DIJ
extends GrayscaleReconstructionByErosion

Performs 2D grayscale reconstruction using ImageJ's implementation.

Constructor Summary

Constructors

Constructor	Description
GrayscaleReconstruction2DIJ()

Method Summary

Modifier and Type	Method	Description
VoxelsUntyped	reconstruction(VoxelsUntyped mask, VoxelsUntyped marker, Optional<ObjectMask> containingMask)	Performs grayscale reconstruction of a mask image from a marker image.

Methods inherited from class org.anchoranalysis.bean.AnchorBean

checkMisconfigured, describeBean, describeChildren, duplicateBean, fields, findFieldsOfClass, getBeanName, getLocalPath, localise, toString

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Details

GrayscaleReconstruction2DIJ

public GrayscaleReconstruction2DIJ()

Method Details

reconstruction

public VoxelsUntyped reconstruction(VoxelsUntyped mask,
 VoxelsUntyped marker,
 Optional<ObjectMask> containingMask)
                             throws OperationFailedException

Description copied from class: GrayscaleReconstructionByErosion

Performs grayscale reconstruction of a mask image from a marker image.

The reconstruction is performed such that mask <= markerImg, but only inside the containingMask (if provided).

Specified by:

reconstruction in class GrayscaleReconstructionByErosion

Parameters:

mask - the VoxelsUntyped representing the mask image

marker - the VoxelsUntyped representing the marker image

containingMask - an optional ObjectMask that limits the reconstruction to a specific region

Returns:

the reconstructed VoxelsUntyped

Throws:

OperationFailedException - if the reconstruction operation fails