Package org.anchoranalysis.plugin.fiji.bean.channel.provider.distance

Class DistanceTransformForEachObject3D

Object

AnchorBean<ChannelProvider>

InitializableBean<ChannelProvider,ImageInitialization>

ImageBean<ChannelProvider>

BeanProviderAsStackBase<ChannelProvider,Channel>

ChannelProvider

FromDimensionsBase

DistanceTransformForEachObject3D

All Implemented Interfaces:

Provider<Channel>, ProviderAsStack

public class DistanceTransformForEachObject3D
extends FromDimensionsBase

Like DistanceTransform3D but applies the distance transform separately for each object in a collection.

A new channel is always created i.e. the input channel is unchanged.

Author:

Owen Feehan

Constructor Summary

Constructors

Constructor	Description
DistanceTransformForEachObject3D()

Method Summary

Modifier and Type	Method	Description
protected Channel	createFromDimensions(Dimensions dimensions)	Creates a channel from the given dimensions.
ObjectCollectionProvider	getObjects()
boolean	isCreateShort()
boolean	isSuppressZ()
void	setCreateShort(boolean createShort)
void	setObjects(ObjectCollectionProvider objects)
void	setSuppressZ(boolean suppressZ)

Methods inherited from class org.anchoranalysis.plugin.image.bean.channel.provider.FromDimensionsBase

get, getDimensions, setDimensions

Methods inherited from class org.anchoranalysis.image.bean.provider.ChannelProvider

getAsStack

Methods inherited from class org.anchoranalysis.bean.initializable.InitializableBean

getInitialization, getLogger, getPropertyInitializer, initialize, initializeRecursive, initRecursiveWithInitializer, isInitialized, onInitialization

Methods inherited from class org.anchoranalysis.bean.AnchorBean

checkMisconfigured, describeBean, describeChildren, duplicateBean, fields, findFieldsOfClass, getBeanName, getLocalPath, localise, toString

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Details

DistanceTransformForEachObject3D

public DistanceTransformForEachObject3D()

Method Details

createFromDimensions

protected Channel createFromDimensions(Dimensions dimensions)
                                throws ProvisionFailedException

Description copied from class: FromDimensionsBase

Creates a channel from the given dimensions.

Specified by:

createFromDimensions in class FromDimensionsBase

Parameters:

dimensions - the Dimensions to use for creating the channel

Returns:

a new Channel with the specified dimensions

Throws:

ProvisionFailedException - if the channel creation fails

getObjects

public ObjectCollectionProvider getObjects()

setObjects

public void setObjects(ObjectCollectionProvider objects)

isSuppressZ

public boolean isSuppressZ()

setSuppressZ

public void setSuppressZ(boolean suppressZ)

isCreateShort

public boolean isCreateShort()

setCreateShort

public void setCreateShort(boolean createShort)