Package org.anchoranalysis.plugin.image.bean.channel.provider.slice

Class ExtractSliceRange

Object

AnchorBean<ChannelProvider>

InitializableBean<ChannelProvider,ImageInitialization>

ImageBean<ChannelProvider>

BeanProviderAsStackBase<ChannelProvider,Channel>

ChannelProvider

ChannelProviderUnary

ExtractSliceRange

All Implemented Interfaces:

Provider<Channel>, ProviderAsStack

public class ExtractSliceRange
extends ChannelProviderUnary

Extracts slices from sliceStart (inclusive) to sliceEnd (inclusive).

If duplicate==true bean-property will ensure it is duplicated, and each channel has independent copies of the slices. If this is not needed duplicate==false results in less memory allocation and copying operations.

Author:

Owen Feehan

Constructor Summary

Constructors

Constructor	Description
ExtractSliceRange()

Method Summary

Modifier and Type	Method	Description
void	checkMisconfigured(BeanInstanceMap defaultInstances)	Checks that a bean's properties conform to expectations.
Channel	createFromChannel(Channel channel)	Creates a Channel given the entity provided by the delegate.
int	getIndexEnd()	Slice index to end extracting from (inclusive).
int	getIndexStart()	Slice index to start extracting from (inclusive).
void	setIndexEnd(int indexEnd)	Slice index to end extracting from (inclusive).
void	setIndexStart(int indexStart)	Slice index to start extracting from (inclusive).

Methods inherited from class org.anchoranalysis.image.bean.provider.ChannelProviderUnary

get, getChannel, setChannel

Methods inherited from class org.anchoranalysis.image.bean.provider.ChannelProvider

getAsStack

Methods inherited from class org.anchoranalysis.bean.initializable.InitializableBean

getInitialization, getLogger, getPropertyInitializer, initialize, initializeRecursive, initRecursiveWithInitializer, isInitialized, onInitialization

Methods inherited from class org.anchoranalysis.bean.AnchorBean

describeBean, describeChildren, duplicateBean, fields, findFieldsOfClass, getBeanName, getLocalPath, localise, toString

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Details

ExtractSliceRange

public ExtractSliceRange()

Method Details

checkMisconfigured

public void checkMisconfigured(BeanInstanceMap defaultInstances)
                        throws BeanMisconfiguredException

Description copied from class: AnchorBean

Checks that a bean's properties conform to expectations.

Overrides:

checkMisconfigured in class AnchorBean<ChannelProvider>

Parameters:

defaultInstances - all available default instances if the DefaultInstance annotation is used

Throws:

BeanMisconfiguredException - if the bean has not been configured properly as XML

createFromChannel

public Channel createFromChannel(Channel channel)

Description copied from class: ChannelProviderUnary

Creates a Channel given the entity provided by the delegate.

Specified by:

createFromChannel in class ChannelProviderUnary

Parameters:

channel - the entity provided by the delegate.

Returns:

the created Channel that is returned by the provider.

getIndexStart

public int getIndexStart()

Slice index to start extracting from (inclusive).

setIndexStart

public void setIndexStart(int indexStart)

Slice index to start extracting from (inclusive).

getIndexEnd

public int getIndexEnd()

Slice index to end extracting from (inclusive).

setIndexEnd

public void setIndexEnd(int indexEnd)

Slice index to end extracting from (inclusive).