Package org.anchoranalysis.plugin.image.bean.mask.provider.convert

Class FromChannel

Object

AnchorBean<MaskProvider>

InitializableBean<MaskProvider,ImageInitialization>

ImageBean<MaskProvider>

BeanProviderAsStackBase<MaskProvider,Mask>

MaskProvider

FromChannelBase

FromChannel

All Implemented Interfaces:

Provider<Mask>, ProviderAsStack

public class FromChannel
extends FromChannelBase

Creates a mask from an existing channel, reusing the channel's buffer and considering all 0 values as off, and 255 values as on.

No check occurs to see if the channel contains voxels that are neither 0 nor 255 but the user should not pass such a channel, as behaviour is undefined.

Author:

Owen Feehan

Constructor Summary

Constructors

Constructor	Description
FromChannel()

Method Summary

Modifier and Type	Method	Description
protected Mask	createFromSource(Channel source)	Creates a Mask from the source Channel.

Methods inherited from class org.anchoranalysis.plugin.image.bean.mask.provider.FromChannelBase

get, getChannel, setChannel

Methods inherited from class org.anchoranalysis.image.bean.provider.MaskProvider

getAsStack

Methods inherited from class org.anchoranalysis.bean.initializable.InitializableBean

getInitialization, getLogger, getPropertyInitializer, initialize, initializeRecursive, initRecursiveWithInitializer, isInitialized, onInitialization

Methods inherited from class org.anchoranalysis.bean.AnchorBean

checkMisconfigured, describeBean, describeChildren, duplicateBean, fields, findFieldsOfClass, getBeanName, getLocalPath, localise, toString

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Details

FromChannel

public FromChannel()

Method Details

createFromSource

protected Mask createFromSource(Channel source)
                         throws CreateException

Description copied from class: FromChannelBase

Creates a Mask from the source Channel.

Specified by:

createFromSource in class FromChannelBase

Parameters:

source - the source channel

Returns:

the created mask

Throws:

CreateException - if the mask creation fails