Package org.anchoranalysis.plugin.image.bean.mask.provider.convert

Class FromStackChannel

Object

AnchorBean<MaskProvider>

InitializableBean<MaskProvider,ImageInitialization>

ImageBean<MaskProvider>

BeanProviderAsStackBase<MaskProvider,Mask>

MaskProvider

FromStackChannel

All Implemented Interfaces:

Provider<Mask>, ProviderAsStack

public class FromStackChannel
extends MaskProvider

Creates a Mask from a specific channel in a stack.

Constructor Summary

Constructors

Constructor	Description
FromStackChannel()

Method Summary

Modifier and Type	Method	Description
Mask	get()	Gets or creates an object of type T.
int	getChannelIndex()	The index of the channel to use from the stack.
String	getStackProviderID()	The identifier of the stack provider to retrieve the stack from.
void	onInitialization(ImageInitialization initialization)	Called after initialization.
void	setChannelIndex(int channelIndex)	The index of the channel to use from the stack.
void	setStackProviderID(String stackProviderID)	The identifier of the stack provider to retrieve the stack from.

Methods inherited from class org.anchoranalysis.image.bean.provider.MaskProvider

getAsStack

Methods inherited from class org.anchoranalysis.bean.initializable.InitializableBean

getInitialization, getLogger, getPropertyInitializer, initialize, initializeRecursive, initRecursiveWithInitializer, isInitialized

Methods inherited from class org.anchoranalysis.bean.AnchorBean

checkMisconfigured, describeBean, describeChildren, duplicateBean, fields, findFieldsOfClass, getBeanName, getLocalPath, localise, toString

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Details

FromStackChannel

public FromStackChannel()

Method Details

onInitialization

public void onInitialization(ImageInitialization initialization)
                      throws InitializeException

Description copied from class: InitializableBean

Called after initialization. An empty implementation is provided, to be overridden as needed in the sub-classes.

Overrides:

onInitialization in class InitializableBean<MaskProvider,ImageInitialization>

Parameters:

initialization - parameters used for initialization.

Throws:

InitializeException - if initialization does not successfully complete.

get

public Mask get()

Description copied from interface: Provider

Gets or creates an object of type T.

Returns:

the object returned by the provider.

getChannelIndex

public int getChannelIndex()

The index of the channel to use from the stack.

setChannelIndex

public void setChannelIndex(int channelIndex)

The index of the channel to use from the stack.

getStackProviderID

public String getStackProviderID()

The identifier of the stack provider to retrieve the stack from.

setStackProviderID

public void setStackProviderID(String stackProviderID)

The identifier of the stack provider to retrieve the stack from.