Package org.anchoranalysis.plugin.image.bean.mask.provider.morphological

Class FitBoxToOnVoxels

Object

AnchorBean<MaskProvider>

InitializableBean<MaskProvider,ImageInitialization>

ImageBean<MaskProvider>

BeanProviderAsStackBase<MaskProvider,Mask>

MaskProvider

MaskProviderUnary

FitBoxToOnVoxels

All Implemented Interfaces:

Provider<Mask>, ProviderAsStack

public class FitBoxToOnVoxels
extends MaskProviderUnary

Fits a box around the on voxels.

The minimally-fitting (i.e. tightest) box that fits is always used.

Author:

Owen Feehan

Constructor Summary

Constructors

Constructor	Description
FitBoxToOnVoxels()

Method Summary

Modifier and Type	Method	Description
Mask	createFromMask(Mask mask)	Creates a Mask given the entity provided by the delegate.
boolean	isSlicesSeparately()
void	setSlicesSeparately(boolean slicesSeparately)

Methods inherited from class org.anchoranalysis.image.bean.provider.MaskProviderUnary

get, getMask, setMask

Methods inherited from class org.anchoranalysis.image.bean.provider.MaskProvider

getAsStack

Methods inherited from class org.anchoranalysis.bean.initializable.InitializableBean

getInitialization, getLogger, getPropertyInitializer, initialize, initializeRecursive, initRecursiveWithInitializer, isInitialized, onInitialization

Methods inherited from class org.anchoranalysis.bean.AnchorBean

checkMisconfigured, describeBean, describeChildren, duplicateBean, fields, findFieldsOfClass, getBeanName, getLocalPath, localise, toString

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Details

FitBoxToOnVoxels

public FitBoxToOnVoxels()

Method Details

createFromMask

public Mask createFromMask(Mask mask)
                    throws ProvisionFailedException

Description copied from class: MaskProviderUnary

Creates a Mask given the entity provided by the delegate.

Specified by:

createFromMask in class MaskProviderUnary

Parameters:

mask - the entity provided by the delegate.

Returns:

the created Mask that is returned by the provider.

Throws:

ProvisionFailedException - if the provider cannot complete successfully.

isSlicesSeparately

public boolean isSlicesSeparately()

setSlicesSeparately

public void setSlicesSeparately(boolean slicesSeparately)