Package org.anchoranalysis.plugin.image.bean.object.provider.mask

Class AndObjectsWithMasks

Object

AnchorBean<ObjectCollectionProvider>

InitializableBean<ObjectCollectionProvider,ImageInitialization>

ImageBean<ObjectCollectionProvider>

ObjectCollectionProvider

ObjectCollectionProviderUnary

AndObjectsWithMasks

All Implemented Interfaces:

Provider<ObjectCollection>

public class AndObjectsWithMasks
extends ObjectCollectionProviderUnary

Reduce the size of individual objects (if neccessary, and minimally) to fit within a binary-mask.

Note the masking overwrites the current objects in situ, so it is often recommended to a duplicate operation beforehand to preserve the existing objects.

This is equivalent to applying a logical AND operation on each voxel for the binary-mask AND object-mask.

Author:

Owen Feehan

Constructor Summary

Constructors

Constructor	Description
AndObjectsWithMasks()

Method Summary

Modifier and Type	Method	Description
ObjectCollection	createFromObjects(ObjectCollection objects)	Creates a ObjectCollection given the entity provided by the delegate.
MaskProvider	getMask()
void	setMask(MaskProvider mask)

Methods inherited from class org.anchoranalysis.image.bean.provider.ObjectCollectionProviderUnary

get, getObjects, setObjects

Methods inherited from class org.anchoranalysis.bean.initializable.InitializableBean

getInitialization, getLogger, getPropertyInitializer, initialize, initializeRecursive, initRecursiveWithInitializer, isInitialized, onInitialization

Methods inherited from class org.anchoranalysis.bean.AnchorBean

checkMisconfigured, describeBean, describeChildren, duplicateBean, fields, findFieldsOfClass, getBeanName, getLocalPath, localise, toString

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Details

AndObjectsWithMasks

public AndObjectsWithMasks()

Method Details

createFromObjects

public ObjectCollection createFromObjects(ObjectCollection objects)
                                   throws ProvisionFailedException

Description copied from class: ObjectCollectionProviderUnary

Creates a ObjectCollection given the entity provided by the delegate.

Specified by:

createFromObjects in class ObjectCollectionProviderUnary

Parameters:

objects - the entity provided by the delegate.

Returns:

the created ObjectCollection that is returned by the provider.

Throws:

ProvisionFailedException - if the provider cannot complete successfully.

getMask

public MaskProvider getMask()

setMask

public void setMask(MaskProvider mask)