Package org.anchoranalysis.plugin.image.bean.object.provider.segment

Class BinarySegmentByObject

Object

AnchorBean<ObjectCollectionProvider>

InitializableBean<ObjectCollectionProvider,ImageInitialization>

ImageBean<ObjectCollectionProvider>

ObjectCollectionProvider

ObjectCollectionProviderUnary

UnaryWithChannelBase

BinarySegmentByObject

All Implemented Interfaces:

Provider<ObjectCollection>

public class BinarySegmentByObject
extends UnaryWithChannelBase

Performs a binary-segmentation using the upstream objects as masks.

Note that if there is more than one upstream object, multiple segmentations occur (one for each mask) and are then combined.

Author:

Owen Feehan

Constructor Summary

Constructors

Constructor	Description
BinarySegmentByObject()

Method Summary

Modifier and Type	Method	Description
protected ObjectCollection	createFromObjects(ObjectCollection objectsSource, Channel channelSource)	Creates objects from a source collection and a channel.
BinarySegmentation	getBinarySgmn()
void	setBinarySgmn(BinarySegmentation binarySgmn)

Methods inherited from class org.anchoranalysis.plugin.image.bean.object.provider.UnaryWithChannelBase

createFromObjects, getChannel, setChannel

Methods inherited from class org.anchoranalysis.image.bean.provider.ObjectCollectionProviderUnary

get, getObjects, setObjects

Methods inherited from class org.anchoranalysis.bean.initializable.InitializableBean

getInitialization, getLogger, getPropertyInitializer, initialize, initializeRecursive, initRecursiveWithInitializer, isInitialized, onInitialization

Methods inherited from class org.anchoranalysis.bean.AnchorBean

checkMisconfigured, describeBean, describeChildren, duplicateBean, fields, findFieldsOfClass, getBeanName, getLocalPath, localise, toString

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Details

BinarySegmentByObject

public BinarySegmentByObject()

Method Details

createFromObjects

protected ObjectCollection createFromObjects(ObjectCollection objectsSource,
 Channel channelSource)
                                      throws ProvisionFailedException

Description copied from class: UnaryWithChannelBase

Creates objects from a source collection and a channel.

Specified by:

createFromObjects in class UnaryWithChannelBase

Parameters:

objectsSource - the source object collection

channelSource - the source channel

Returns:

the newly created object collection

Throws:

ProvisionFailedException - if object creation fails

getBinarySgmn

public BinarySegmentation getBinarySgmn()

setBinarySgmn

public void setBinarySgmn(BinarySegmentation binarySgmn)