Package org.anchoranalysis.plugin.image.bean.object.provider.segment

Class SegmentWithSeeds

Object

AnchorBean<ObjectCollectionProvider>

InitializableBean<ObjectCollectionProvider,ImageInitialization>

ImageBean<ObjectCollectionProvider>

ObjectCollectionProvider

WithChannelBase

SegmentWithSeeds

All Implemented Interfaces:

Provider<ObjectCollection>

public class SegmentWithSeeds
extends WithChannelBase

Takes each object one-by-one from objectsSource, and finds matching seeds from objectsSeeds

Author:

Owen Feehan

Constructor Summary

Constructors

Constructor	Description
SegmentWithSeeds()

Method Summary

Modifier and Type	Method	Description
protected ObjectCollection	createFromChannel(Channel channel)	Creates an ObjectCollection from a source Channel.
ObjectCollectionProvider	getObjectsSeeds()
ObjectCollectionProvider	getObjectsSource()
SegmentChannelIntoObjects	getSegment()
void	setObjectsSeeds(ObjectCollectionProvider objectsSeeds)
void	setObjectsSource(ObjectCollectionProvider objectsSource)
void	setSegment(SegmentChannelIntoObjects segment)

Methods inherited from class org.anchoranalysis.plugin.image.bean.object.provider.WithChannelBase

get, getChannel, setChannel

Methods inherited from class org.anchoranalysis.bean.initializable.InitializableBean

getInitialization, getLogger, getPropertyInitializer, initialize, initializeRecursive, initRecursiveWithInitializer, isInitialized, onInitialization

Methods inherited from class org.anchoranalysis.bean.AnchorBean

checkMisconfigured, describeBean, describeChildren, duplicateBean, fields, findFieldsOfClass, getBeanName, getLocalPath, localise, toString

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Details

SegmentWithSeeds

public SegmentWithSeeds()

Method Details

createFromChannel

protected ObjectCollection createFromChannel(Channel channel)
                                      throws ProvisionFailedException

Description copied from class: WithChannelBase

Creates an ObjectCollection from a source Channel.

Specified by:

createFromChannel in class WithChannelBase

Parameters:

channel - the source channel

Returns:

the created object collection

Throws:

ProvisionFailedException - if object creation fails

getObjectsSource

public ObjectCollectionProvider getObjectsSource()

setObjectsSource

public void setObjectsSource(ObjectCollectionProvider objectsSource)

getObjectsSeeds

public ObjectCollectionProvider getObjectsSeeds()

setObjectsSeeds

public void setObjectsSeeds(ObjectCollectionProvider objectsSeeds)

getSegment

public SegmentChannelIntoObjects getSegment()

setSegment

public void setSegment(SegmentChannelIntoObjects segment)