Package org.anchoranalysis.plugin.image.bean.object.provider.slice

Class ExtendInZWithinContainer

Object

AnchorBean<ObjectCollectionProvider>

InitializableBean<ObjectCollectionProvider,ImageInitialization>

ImageBean<ObjectCollectionProvider>

ObjectCollectionProvider

ObjectCollectionProviderUnary

WithContainerBase

ExtendInZWithinContainer

All Implemented Interfaces:

Provider<ObjectCollection>

public class ExtendInZWithinContainer
extends WithContainerBase

Extends an object (2D/3D) as much as it can within the z-slices of a containing object

An object-collection is produced with an identical number of objects, but with each expanded in the z-dimension.

If the input-object is a 2D-slice it is replicated directly, if it is already a 3D-object its flattened version (a maximum intensity projection) is used.

Author:

Owen Feehan

Constructor Summary

Constructors

Constructor	Description
ExtendInZWithinContainer()

Method Summary

Modifier and Type	Method	Description
ObjectCollection	createFromObjects(ObjectCollection objectsSource)	Creates a ObjectCollection given the entity provided by the delegate.

Methods inherited from class org.anchoranalysis.plugin.image.bean.object.provider.WithContainerBase

containerOptional, containerRequired, getObjectsContainer, setObjectsContainer

Methods inherited from class org.anchoranalysis.image.bean.provider.ObjectCollectionProviderUnary

get, getObjects, setObjects

Methods inherited from class org.anchoranalysis.bean.initializable.InitializableBean

getInitialization, getLogger, getPropertyInitializer, initialize, initializeRecursive, initRecursiveWithInitializer, isInitialized, onInitialization

Methods inherited from class org.anchoranalysis.bean.AnchorBean

checkMisconfigured, describeBean, describeChildren, duplicateBean, fields, findFieldsOfClass, getBeanName, getLocalPath, localise, toString

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Details

ExtendInZWithinContainer

public ExtendInZWithinContainer()

Method Details

createFromObjects

public ObjectCollection createFromObjects(ObjectCollection objectsSource)
                                   throws ProvisionFailedException

Description copied from class: ObjectCollectionProviderUnary

Creates a ObjectCollection given the entity provided by the delegate.

Specified by:

createFromObjects in class ObjectCollectionProviderUnary

Parameters:

objectsSource - the entity provided by the delegate.

Returns:

the created ObjectCollection that is returned by the provider.

Throws:

ProvisionFailedException - if the provider cannot complete successfully.