Package org.anchoranalysis.plugin.image.bean.object.provider.split

Class SplitIntoSquares

Object

AnchorBean<ObjectCollectionProvider>

InitializableBean<ObjectCollectionProvider,ImageInitialization>

ImageBean<ObjectCollectionProvider>

ObjectCollectionProvider

ObjectCollectionProviderUnary

SplitIntoSquares

All Implemented Interfaces:

Provider<ObjectCollection>

public class SplitIntoSquares
extends ObjectCollectionProviderUnary

Splits objects into sub-objects by cutting by an orthogonal square lattice (like a chessboard).

Only splits in x and y dimensions; the z-dimension is unaffected.

The cuts are mostly squares, but sometimes cuts are rectangles in the leftover space, which are never larger in any dimension than squareSize

An optional minimim number of on voxels is applied to any object (after it has been cut) to exist in the created collection.

Author:

Owen Feehan

Constructor Summary

Constructors

Constructor	Description
SplitIntoSquares()

Method Summary

Modifier and Type	Method	Description
ObjectCollection	createFromObjects(ObjectCollection objectCollection)	Creates a ObjectCollection given the entity provided by the delegate.
int	getMinNumberVoxels()	Only includes squares that have at least this number of voxels.
int	getSquareSize()
void	setMinNumberVoxels(int minNumberVoxels)	Only includes squares that have at least this number of voxels.
void	setSquareSize(int squareSize)

Methods inherited from class org.anchoranalysis.image.bean.provider.ObjectCollectionProviderUnary

get, getObjects, setObjects

Methods inherited from class org.anchoranalysis.bean.initializable.InitializableBean

getInitialization, getLogger, getPropertyInitializer, initialize, initializeRecursive, initRecursiveWithInitializer, isInitialized, onInitialization

Methods inherited from class org.anchoranalysis.bean.AnchorBean

checkMisconfigured, describeBean, describeChildren, duplicateBean, fields, findFieldsOfClass, getBeanName, getLocalPath, localise, toString

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Details

SplitIntoSquares

public SplitIntoSquares()

Method Details

createFromObjects

public ObjectCollection createFromObjects(ObjectCollection objectCollection)

Description copied from class: ObjectCollectionProviderUnary

Creates a ObjectCollection given the entity provided by the delegate.

Specified by:

createFromObjects in class ObjectCollectionProviderUnary

Parameters:

objectCollection - the entity provided by the delegate.

Returns:

the created ObjectCollection that is returned by the provider.

getSquareSize

public int getSquareSize()

setSquareSize

public void setSquareSize(int squareSize)

getMinNumberVoxels

public int getMinNumberVoxels()

Only includes squares that have at least this number of voxels.

setMinNumberVoxels

public void setMinNumberVoxels(int minNumberVoxels)

Only includes squares that have at least this number of voxels.