Package org.anchoranalysis.plugin.image.bean.stack.provider

Class FromChannelOrMask

Object

AnchorBean<StackProvider>

InitializableBean<StackProvider,ImageInitialization>

ImageBean<StackProvider>

BeanProviderAsStackBase<StackProvider,Stack>

StackProvider

FromChannelOrMask

All Implemented Interfaces:

Provider<Stack>, ProviderAsStack

public class FromChannelOrMask
extends StackProvider

Creates a Stack from a Channel or Mask (reusing the voxel buffers).

Author:

Owen Feehan

Constructor Summary

Constructors

Constructor	Description
FromChannelOrMask()
FromChannelOrMask(ChannelProvider channel)	Creates a new instance with a specified channel provider.

Method Summary

Modifier and Type	Method	Description
void	checkMisconfigured(BeanInstanceMap defaultInstances)	Checks that a bean's properties conform to expectations.
Stack	get()	Gets or creates an object of type T.
ChannelProvider	getChannel()	A channel that is provided to the stack.
Provider<Mask>	getMask()	A mask that is provided to the stack.
boolean	isRgb()	If true, the output contains three channels (the input and two duplicates) instead of one.
void	setChannel(ChannelProvider channel)	A channel that is provided to the stack.
void	setMask(Provider<Mask> mask)	A mask that is provided to the stack.
void	setRgb(boolean rgb)	If true, the output contains three channels (the input and two duplicates) instead of one.

Methods inherited from class org.anchoranalysis.image.bean.provider.stack.StackProvider

getAsStack

Methods inherited from class org.anchoranalysis.bean.initializable.InitializableBean

getInitialization, getLogger, getPropertyInitializer, initialize, initializeRecursive, initRecursiveWithInitializer, isInitialized, onInitialization

Methods inherited from class org.anchoranalysis.bean.AnchorBean

describeBean, describeChildren, duplicateBean, fields, findFieldsOfClass, getBeanName, getLocalPath, localise, toString

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Details

FromChannelOrMask

public FromChannelOrMask(ChannelProvider channel)

Creates a new instance with a specified channel provider.

Parameters:

channel - the ChannelProvider to use.

FromChannelOrMask

public FromChannelOrMask()

Method Details

checkMisconfigured

public void checkMisconfigured(BeanInstanceMap defaultInstances)
                        throws BeanMisconfiguredException

Description copied from class: AnchorBean

Checks that a bean's properties conform to expectations.

Overrides:

checkMisconfigured in class AnchorBean<StackProvider>

Parameters:

defaultInstances - all available default instances if the DefaultInstance annotation is used

Throws:

BeanMisconfiguredException - if the bean has not been configured properly as XML

get

public Stack get()
          throws ProvisionFailedException

Description copied from interface: Provider

Gets or creates an object of type T.

Returns:

the object returned by the provider.

Throws:

ProvisionFailedException - if the object cannot be returned.

getChannel

public ChannelProvider getChannel()

A channel that is provided to the stack. Either this or mask must be set.

setChannel

public void setChannel(ChannelProvider channel)

A channel that is provided to the stack. Either this or mask must be set.

getMask

public Provider<Mask> getMask()

A mask that is provided to the stack. Either this or channel must be set.

setMask

public void setMask(Provider<Mask> mask)

A mask that is provided to the stack. Either this or channel must be set.

isRgb

public boolean isRgb()

If true, the output contains three channels (the input and two duplicates) instead of one.

setRgb

public void setRgb(boolean rgb)

If true, the output contains three channels (the input and two duplicates) instead of one.