Package org.anchoranalysis.plugin.image.feature.bean.object.single.energy

Class CountEqual

Object

AnchorBean<Feature<FeatureInputSingleObject>>

InitializableBean<Feature<FeatureInputSingleObject>,FeatureInitialization>

Feature<FeatureInputSingleObject>

FeatureSingleObject

SpecificEnergyChannelBase

CountEqual

public class CountEqual
extends SpecificEnergyChannelBase

Counts the number of voxels in an object that have a specific intensity value in a channel.

Constructor Summary

Constructors

Constructor	Description
CountEqual()

Method Summary

Modifier and Type	Method	Description
protected double	calculateWithChannel(ObjectMask object, Channel channel)	Calculates the number of voxels in the object that have the specified intensity value in the channel.
int	getValue()	The intensity value to count.
void	setValue(int value)	The intensity value to count.

Methods inherited from class org.anchoranalysis.plugin.image.feature.bean.object.single.energy.SpecificEnergyChannelBase

calculate, getEnergyIndex, setEnergyIndex

Methods inherited from class org.anchoranalysis.image.feature.bean.object.single.FeatureSingleObject

inputType

Methods inherited from class org.anchoranalysis.feature.bean.Feature

assignTo, beforeCalc, calculateCheckInitialized, castAs, createListChildFeatures, describeBean, describeParameters, descriptionLong, duplicateChangeName, getCustomName, getFriendlyName, onInitialization, setCustomName, toString

Methods inherited from class org.anchoranalysis.bean.initializable.InitializableBean

getInitialization, getLogger, getPropertyInitializer, initialize, initializeRecursive, initRecursiveWithInitializer, isInitialized

Methods inherited from class org.anchoranalysis.bean.AnchorBean

checkMisconfigured, describeChildren, duplicateBean, fields, findFieldsOfClass, getBeanName, getLocalPath, localise

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Details

CountEqual

public CountEqual()

Method Details

calculateWithChannel

protected double calculateWithChannel(ObjectMask object,
 Channel channel)
                               throws FeatureCalculationException

Calculates the number of voxels in the object that have the specified intensity value in the channel.

Specified by:

calculateWithChannel in class SpecificEnergyChannelBase

Parameters:

object - the ObjectMask defining the region of interest

channel - the Channel to analyze

Returns:

the count of voxels with the specified intensity value

Throws:

FeatureCalculationException - if the calculation fails

getValue

public int getValue()

The intensity value to count. Defaults to the 'on' value of BinaryValuesInt.

setValue

public void setValue(int value)

The intensity value to count. Defaults to the 'on' value of BinaryValuesInt.