Package org.anchoranalysis.plugin.image.feature.bean.object.single.shape

Class ObjectRadiusStandardDeviation

Object

AnchorBean<Feature<FeatureInputSingleObject>>

InitializableBean<Feature<FeatureInputSingleObject>,FeatureInitialization>

Feature<FeatureInputSingleObject>

FeatureSingleObject

ObjectRadiusStandardDeviation

public class ObjectRadiusStandardDeviation
extends FeatureSingleObject

Calculates the standard deviation of distances from surface voxels to the centroid of an ObjectMask.

Optionally, it can calculate the coefficient of variation instead of the standard deviation.

Constructor Summary

Constructors

Constructor	Description
ObjectRadiusStandardDeviation()

Method Summary

Modifier and Type	Method	Description
double	calculate(FeatureCalculationInput<FeatureInputSingleObject> input)	Calculates a value for some input.
boolean	isCov()	If true, returns the coefficient of variation (stdDev/mean) instead of standard deviation.
void	setCov(boolean cov)	If true, returns the coefficient of variation (stdDev/mean) instead of standard deviation.

Methods inherited from class org.anchoranalysis.image.feature.bean.object.single.FeatureSingleObject

inputType

Methods inherited from class org.anchoranalysis.feature.bean.Feature

assignTo, beforeCalc, calculateCheckInitialized, castAs, createListChildFeatures, describeBean, describeParameters, descriptionLong, duplicateChangeName, getCustomName, getFriendlyName, onInitialization, setCustomName, toString

Methods inherited from class org.anchoranalysis.bean.initializable.InitializableBean

getInitialization, getLogger, getPropertyInitializer, initialize, initializeRecursive, initRecursiveWithInitializer, isInitialized

Methods inherited from class org.anchoranalysis.bean.AnchorBean

checkMisconfigured, describeChildren, duplicateBean, fields, findFieldsOfClass, getBeanName, getLocalPath, localise

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Details

ObjectRadiusStandardDeviation

public ObjectRadiusStandardDeviation()

Method Details

calculate

public double calculate(FeatureCalculationInput<FeatureInputSingleObject> input)
                 throws FeatureCalculationException

Description copied from class: Feature

Calculates a value for some input.

Specified by:

calculate in class Feature<FeatureInputSingleObject>

Parameters:

input - the input to the calculation.

Returns:

the result of the calculation.

Throws:

FeatureCalculationException - if the calculation cannot successfully complete.

isCov

public boolean isCov()

If true, returns the coefficient of variation (stdDev/mean) instead of standard deviation.

setCov

public void setCov(boolean cov)

If true, returns the coefficient of variation (stdDev/mean) instead of standard deviation.