Package org.anchoranalysis.plugin.image.feature.bean.score

Class Difference

Object

AnchorBean<VoxelScore>

InitializableBean<VoxelScore,ImageInitialization>

ImageBean<VoxelScore>

VoxelScore

Difference

public class Difference
extends VoxelScore

Author:

Owen Feehan

Constructor Summary

Constructors

Constructor	Description
Difference()

Method Summary

Modifier and Type	Method	Description
double	calculate(int[] voxelIntensities)	Calculates a score for a set of voxel intensities.
int	getChannelFirst()	Index of first channel
int	getChannelSecond()	Index of second channel
int	getMinDifference()	A minimum difference, below which 0.0 is returned
double	getWidth()	Width (what the difference is divided by)
void	setChannelFirst(int channelFirst)	Index of first channel
void	setChannelSecond(int channelSecond)	Index of second channel
void	setMinDifference(int minDifference)	A minimum difference, below which 0.0 is returned
void	setWidth(double width)	Width (what the difference is divided by)

Methods inherited from class org.anchoranalysis.image.feature.bean.VoxelScore

initialize

Methods inherited from class org.anchoranalysis.bean.initializable.InitializableBean

getInitialization, getLogger, getPropertyInitializer, initialize, initializeRecursive, initRecursiveWithInitializer, isInitialized, onInitialization

Methods inherited from class org.anchoranalysis.bean.AnchorBean

checkMisconfigured, describeBean, describeChildren, duplicateBean, fields, findFieldsOfClass, getBeanName, getLocalPath, localise, toString

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Details

Difference

public Difference()

Method Details

calculate

public double calculate(int[] voxelIntensities)
                 throws FeatureCalculationException

Description copied from class: VoxelScore

Calculates a score for a set of voxel intensities.

Specified by:

calculate in class VoxelScore

Parameters:

voxelIntensities - an array of voxel intensity values

Returns:

the calculated score for the given voxel intensities

Throws:

FeatureCalculationException - if the calculation fails

getChannelFirst

public int getChannelFirst()

Index of first channel

setChannelFirst

public void setChannelFirst(int channelFirst)

Index of first channel

getChannelSecond

public int getChannelSecond()

Index of second channel

setChannelSecond

public void setChannelSecond(int channelSecond)

Index of second channel

getWidth

public double getWidth()

Width (what the difference is divided by)

setWidth

public void setWidth(double width)

Width (what the difference is divided by)

getMinDifference

public int getMinDifference()

A minimum difference, below which 0.0 is returned

setMinDifference

public void setMinDifference(int minDifference)

A minimum difference, below which 0.0 is returned