Uses of Class
org.anchoranalysis.feature.calculate.NamedFeatureCalculateException

Packages that use NamedFeatureCalculateException

Package	Description
org.anchoranalysis.feature.calculate	Sub-feature units of calculation that can be cached.
org.anchoranalysis.feature.calculate.bound	Interfaces like FeatureCalculator but bound to particular features.
org.anchoranalysis.feature.session	A defined context in which one or more features are provided inputs and produce results.
org.anchoranalysis.image.feature.calculator	Implementations of FeatureCalculatorMulti related to images, especially to create tables of feature-calculations.
org.anchoranalysis.image.feature.calculator.merged	A particular implementation of FeatureCalculatorMulti for feature-calculations based upon pairs of image-objects.
org.anchoranalysis.mpp.feature.energy.marks	Non-bean classes pertaining to calculating energy of {org.anchoranalysis.mpp.mark.Mark}s.
org.anchoranalysis.mpp.feature.energy.saved	Saved snapshots of energy-calculations.
org.anchoranalysis.mpp.feature.energy.scheme	Factorized form of storing the energy during an energy-minimization optimization scheme.
org.anchoranalysis.mpp.feature.mark	Non-bean classes for calculating feature-values related to Marks.
org.anchoranalysis.plugin.image.task.bean.feature.source	Source of rows in feature-tables with FeatureSource and derived classes.

Uses of NamedFeatureCalculateException in org.anchoranalysis.feature.calculate

Methods in org.anchoranalysis.feature.calculate that throw NamedFeatureCalculateException

Modifier and Type	Method	Description
ResultsVector	FeatureCalculationInput.calculate(FeatureList<T> features)	Calculates the results of several features using this input.
default ResultsVector	FeatureCalculator.calculate(FeatureList<T> features, FeatureCalculationInput<T> input)	Calculates results for a list of features with a particular input, throwing an exception if a calculation fails.

Uses of NamedFeatureCalculateException in org.anchoranalysis.feature.calculate.bound

Methods in org.anchoranalysis.feature.calculate.bound that throw NamedFeatureCalculateException

Modifier and Type	Method	Description
ResultsVector	FeatureCalculatorMulti.calculate(T input)	Calculate the results of the features with a particular input.
default ResultsVector	FeatureCalculatorMulti.calculate(T input, ErrorReporter errorReporter, boolean suppressErrors)	Calculates the results for an input, either calling FeatureCalculatorMulti.calculate(T) or FeatureCalculatorMulti.calculateSuppressErrors(T, org.anchoranalysis.core.log.error.ErrorReporter) depending on a flag.
ResultsVector	FeatureCalculatorMulti.calculate(T input, FeatureList<T> featuresSubset)	Calculates the results of a subset of the features with a particular input.
ResultsVector	FeatureCalculatorMultiChangeInput.calculate(T input)
ResultsVector	FeatureCalculatorMultiChangeInput.calculate(T input, FeatureList<T> featuresSubset)

Uses of NamedFeatureCalculateException in org.anchoranalysis.feature.session

Methods in org.anchoranalysis.feature.session that throw NamedFeatureCalculateException

Modifier and Type	Method	Description
ResultsVector	SequentialSession.calculate(T input)
ResultsVector	SequentialSession.calculate(T input, FeatureList<T> featuresSubset)
ResultsVector	SessionInputSequential.calculate(FeatureList<T> features)

Uses of NamedFeatureCalculateException in org.anchoranalysis.image.feature.calculator

Methods in org.anchoranalysis.image.feature.calculator that throw NamedFeatureCalculateException

Modifier and Type	Method	Description
ResultsVector	SingleTableCalculator.calculate(FeatureInputSingleObject input)
ResultsVector	SingleTableCalculator.calculate(FeatureInputSingleObject input, FeatureList<FeatureInputSingleObject> featuresSubset)

Uses of NamedFeatureCalculateException in org.anchoranalysis.image.feature.calculator.merged

Methods in org.anchoranalysis.image.feature.calculator.merged that throw NamedFeatureCalculateException

Modifier and Type	Method	Description
ResultsVector	PairsTableCalculator.calculate(FeatureInputPairObjects input)
ResultsVector	PairsTableCalculator.calculateMaybeSuppressErrors(FeatureInputPairObjects input, ErrorReporter errorReporter)	Calculates features for the input, optionally suppressing errors.

Uses of NamedFeatureCalculateException in org.anchoranalysis.mpp.feature.energy.marks

Methods in org.anchoranalysis.mpp.feature.energy.marks that throw NamedFeatureCalculateException

Modifier and Type	Method	Description
void	MarksWithEnergyBreakdown.add(EnergyMemoList wrapperInd, VoxelizedMarkMemo newPxlMarkMemo, EnergyStackWithoutParameters stack)	Adds a new mark to the collection and updates energies.
void	MarksWithEnergyBreakdown.exchange(EnergyMemoList wrapperInd, int index, VoxelizedMarkMemo newMark, EnergyStack energyStack)	Exchanges a mark at a specific index with a new mark and updates energies.
void	MarksWithEnergyBreakdown.initialize()	Initializes the energy calculations.
void	MarksWithEnergyBreakdown.remove(EnergyMemoList wrapperInd, int index, VoxelizedMarkMemo markToRemove, EnergyStackWithoutParameters stack)	Removes a mark at a specific index from the collection and updates energies.
void	MarksWithEnergyBreakdown.remove(EnergyMemoList wrapperInd, VoxelizedMarkMemo markToRemove, EnergyStackWithoutParameters stack)	Removes a specific mark from the collection and updates energies.
void	MarksWithEnergyBreakdown.removeTwo(EnergyMemoList wrapperInd, int index1, int index2, EnergyStackWithoutParameters energyStack)	Removes two marks at specific indices from the collection and updates energies.
void	MarksWithEnergyBreakdown.updateTotal(EnergyMemoList pxlMarkMemoList, EnergyStackWithoutParameters stack)	Updates the total energy based on the current state.

Uses of NamedFeatureCalculateException in org.anchoranalysis.mpp.feature.energy.saved

Methods in org.anchoranalysis.mpp.feature.energy.saved that throw NamedFeatureCalculateException

Modifier and Type	Method	Description
void	EnergySavedAll.calc(EnergyMemoList memoList, EnergySchemeWithSharedFeatures energyScheme, EnergyStackWithoutParameters energyStack)	Calculates the total energy for all items using the provided energy scheme and stack.

Uses of NamedFeatureCalculateException in org.anchoranalysis.mpp.feature.energy.scheme

Methods in org.anchoranalysis.mpp.feature.energy.scheme that throw NamedFeatureCalculateException

Modifier and Type	Method	Description
EnergyTotal	EnergySchemeWithSharedFeatures.totalAll(EnergyMemoList pxlMarkMemoList, EnergyStackWithoutParameters raster)	Calculates the total energy for all marks in the list.
EnergyTotal	EnergySchemeWithSharedFeatures.totalIndividual(VoxelizedMarkMemo pmm, EnergyStackWithoutParameters raster)	Calculates the total energy for an individual mark.

Uses of NamedFeatureCalculateException in org.anchoranalysis.mpp.feature.mark

Methods in org.anchoranalysis.mpp.feature.mark that throw NamedFeatureCalculateException

Modifier and Type	Method	Description
VoxelizedMarkMemo	EnergyMemoList.add(EnergySavedIndividual energySavedInd, VoxelizedMarkMemo memo, EnergyStackWithoutParameters stack, EnergySchemeWithSharedFeatures energyScheme)	Adds a new mark to the list and calculates its energy.
VoxelizedMarkMemo	EnergyMemoList.exchange(EnergySavedIndividual energySavedInd, int index, VoxelizedMarkMemo newMark, EnergyStackWithoutParameters stack, EnergySchemeWithSharedFeatures energySchemeTotal)	Exchanges a mark at a specific index with a new mark and recalculates energies.

Constructors in org.anchoranalysis.mpp.feature.mark that throw NamedFeatureCalculateException

Modifier	Constructor	Description
	EnergyMemoList(EnergySavedIndividual savedInd, EnergyStackWithoutParameters energyStack, MarkCollection marks, EnergySchemeWithSharedFeatures energySchemeTotal)	Creates an energy memo list with the given parameters.

Uses of NamedFeatureCalculateException in org.anchoranalysis.plugin.image.task.bean.feature.source

Methods in org.anchoranalysis.plugin.image.task.bean.feature.source that throw NamedFeatureCalculateException

Modifier and Type	Method	Description
protected ResultsVectorWithThumbnail	FromHistogram.calculateResultsForInput(FileInput input, FeatureCalculationContext<FeatureList<FeatureInputHistogram>> context)
protected ResultsVectorWithThumbnail	FromImage.calculateResultsForInput(ProvidesStackInput input, FeatureCalculationContext<FeatureList<FeatureInputStack>> context)
protected ResultsVectorWithThumbnail	FromImageMetadata.calculateResultsForInput(ImageMetadataInput input, FeatureCalculationContext<FeatureList<FeatureInputImageMetadata>> context)
protected abstract ResultsVectorWithThumbnail	SingleRowPerInput.calculateResultsForInput(T input, FeatureCalculationContext<FeatureList<S>> context)	Calculates feature-results for a particular input.