Uses of Class
org.anchoranalysis.feature.energy.EnergyStackWithoutParameters

Packages that use EnergyStackWithoutParameters

Package	Description
org.anchoranalysis.feature.energy	A particular stack used in feature-calculations called a EnergyStack together with related classes.
org.anchoranalysis.feature.initialization	Initialization parameters used for beans in org.anchoranalysis.feature.bean.
org.anchoranalysis.image.feature.input	Image-related implementations of FeatureInput.
org.anchoranalysis.mpp.feature.energy.marks	Non-bean classes pertaining to calculating energy of {org.anchoranalysis.mpp.mark.Mark}s.
org.anchoranalysis.mpp.feature.energy.saved	Saved snapshots of energy-calculations.
org.anchoranalysis.mpp.feature.energy.scheme	Factorized form of storing the energy during an energy-minimization optimization scheme.
org.anchoranalysis.mpp.feature.mark	Non-bean classes for calculating feature-values related to Marks.
org.anchoranalysis.mpp.mark.voxelized	A mark after a voxel-representation has been inferred.
org.anchoranalysis.mpp.mark.voxelized.memo	Memoization of VoxelizedMarks.
org.anchoranalysis.test.image.load	Load test image data.

Uses of EnergyStackWithoutParameters in org.anchoranalysis.feature.energy

Methods in org.anchoranalysis.feature.energy that return EnergyStackWithoutParameters

Modifier and Type	Method	Description
EnergyStackWithoutParameters	EnergyStackWithoutParameters.extractSlice(int z)	Extract a particular z-slice from the EnergyStackWithoutParameters as a new stack.
EnergyStackWithoutParameters	EnergyStack.withoutParameters()	The energy-stack without associated parameters.

Constructors in org.anchoranalysis.feature.energy with parameters of type EnergyStackWithoutParameters

Modifier	Constructor	Description
	EnergyStack(EnergyStackWithoutParameters energyStack)	Create from a EnergyStackWithoutParameters without any additional parameters.
	EnergyStack(EnergyStackWithoutParameters delegate, Dictionary parameters)	Creates a new EnergyStack instance.

Uses of EnergyStackWithoutParameters in org.anchoranalysis.feature.initialization

Methods in org.anchoranalysis.feature.initialization that return types with arguments of type EnergyStackWithoutParameters

Modifier and Type	Method	Description
Optional<EnergyStackWithoutParameters>	FeatureInitialization.getEnergyStack()	An energy-stack, which may form an input to the feature for calculation.

Uses of EnergyStackWithoutParameters in org.anchoranalysis.image.feature.input

Constructors in org.anchoranalysis.image.feature.input with parameters of type EnergyStackWithoutParameters

Modifier	Constructor	Description
	FeatureInputStack(EnergyStackWithoutParameters energyStack)	Constructs a FeatureInputStack with the given energy stack.

Constructor parameters in org.anchoranalysis.image.feature.input with type arguments of type EnergyStackWithoutParameters

Modifier	Constructor	Description
	FeatureInputStack(Optional<EnergyStackWithoutParameters> energyStack)	Constructs a FeatureInputStack with an optional energy stack.

Uses of EnergyStackWithoutParameters in org.anchoranalysis.mpp.feature.energy.marks

Methods in org.anchoranalysis.mpp.feature.energy.marks with parameters of type EnergyStackWithoutParameters

Modifier and Type	Method	Description
void	MarksWithEnergyBreakdown.add(EnergyMemoList wrapperInd, VoxelizedMarkMemo newPxlMarkMemo, EnergyStackWithoutParameters stack)	Adds a new mark to the collection and updates energies.
void	MarksWithEnergyBreakdown.remove(EnergyMemoList wrapperInd, int index, VoxelizedMarkMemo markToRemove, EnergyStackWithoutParameters stack)	Removes a mark at a specific index from the collection and updates energies.
void	MarksWithEnergyBreakdown.remove(EnergyMemoList wrapperInd, VoxelizedMarkMemo markToRemove, EnergyStackWithoutParameters stack)	Removes a specific mark from the collection and updates energies.
void	MarksWithEnergyBreakdown.removeTwo(EnergyMemoList wrapperInd, int index1, int index2, EnergyStackWithoutParameters energyStack)	Removes two marks at specific indices from the collection and updates energies.
void	MarksWithEnergyBreakdown.updateTotal(EnergyMemoList pxlMarkMemoList, EnergyStackWithoutParameters stack)	Updates the total energy based on the current state.

Uses of EnergyStackWithoutParameters in org.anchoranalysis.mpp.feature.energy.saved

Methods in org.anchoranalysis.mpp.feature.energy.saved with parameters of type EnergyStackWithoutParameters

Modifier and Type	Method	Description
void	EnergySavedAll.calc(EnergyMemoList memoList, EnergySchemeWithSharedFeatures energyScheme, EnergyStackWithoutParameters energyStack)	Calculates the total energy for all items using the provided energy scheme and stack.

Uses of EnergyStackWithoutParameters in org.anchoranalysis.mpp.feature.energy.scheme

Methods in org.anchoranalysis.mpp.feature.energy.scheme with parameters of type EnergyStackWithoutParameters

Modifier and Type	Method	Description
Dictionary	DictionaryForImageCreator.create(EnergyStackWithoutParameters energyStack)	Creates a dictionary containing calculated image features for a given energy stack.
EnergyTotal	EnergySchemeWithSharedFeatures.totalAll(EnergyMemoList pxlMarkMemoList, EnergyStackWithoutParameters raster)	Calculates the total energy for all marks in the list.
EnergyTotal	EnergySchemeWithSharedFeatures.totalIndividual(VoxelizedMarkMemo pmm, EnergyStackWithoutParameters raster)	Calculates the total energy for an individual mark.

Uses of EnergyStackWithoutParameters in org.anchoranalysis.mpp.feature.mark

Methods in org.anchoranalysis.mpp.feature.mark with parameters of type EnergyStackWithoutParameters

Modifier and Type	Method	Description
VoxelizedMarkMemo	EnergyMemoList.add(EnergySavedIndividual energySavedInd, VoxelizedMarkMemo memo, EnergyStackWithoutParameters stack, EnergySchemeWithSharedFeatures energyScheme)	Adds a new mark to the list and calculates its energy.
VoxelizedMarkMemo	EnergyMemoList.exchange(EnergySavedIndividual energySavedInd, int index, VoxelizedMarkMemo newMark, EnergyStackWithoutParameters stack, EnergySchemeWithSharedFeatures energySchemeTotal)	Exchanges a mark at a specific index with a new mark and recalculates energies.

Constructors in org.anchoranalysis.mpp.feature.mark with parameters of type EnergyStackWithoutParameters

Modifier	Constructor	Description
	EnergyMemoList(EnergySavedIndividual savedInd, EnergyStackWithoutParameters energyStack, MarkCollection marks, EnergySchemeWithSharedFeatures energySchemeTotal)	Creates an energy memo list with the given parameters.

Uses of EnergyStackWithoutParameters in org.anchoranalysis.mpp.mark.voxelized

Methods in org.anchoranalysis.mpp.mark.voxelized with parameters of type EnergyStackWithoutParameters

Modifier and Type	Method	Description
static VoxelizedMarkHistogram	VoxelizedMarkFactory.create(Mark mark, EnergyStackWithoutParameters stack, RegionMap regionMap)	Creates a new VoxelizedMarkHistogram instance.

Uses of EnergyStackWithoutParameters in org.anchoranalysis.mpp.mark.voxelized.memo

Methods in org.anchoranalysis.mpp.mark.voxelized.memo with parameters of type EnergyStackWithoutParameters

Modifier and Type	Method	Description
static VoxelizedMarkMemo	VoxelizedMarkMemoFactory.create(Mark mark, EnergyStackWithoutParameters stack, RegionMap regionMap)	Creates a new VoxelizedMarkMemo instance.

Constructors in org.anchoranalysis.mpp.mark.voxelized.memo with parameters of type EnergyStackWithoutParameters

Modifier	Constructor	Description
	VoxelizedMarkMemo(Mark mark, EnergyStackWithoutParameters stack, RegionMap regionMap)	Creates a new VoxelizedMarkMemo.

Uses of EnergyStackWithoutParameters in org.anchoranalysis.test.image.load

Methods in org.anchoranalysis.test.image.load that return EnergyStackWithoutParameters

Modifier and Type	Method	Description
EnergyStackWithoutParameters	CarImageLoader.carGrayscale16BitAsEnergy()	Loads the 16-bit grayscale image of a car and wraps it in an EnergyStackWithoutParameters.
EnergyStackWithoutParameters	CarImageLoader.carGrayscale8BitAsEnergy()	Loads the 8-bit grayscale image of a car and wraps it in an EnergyStackWithoutParameters.
EnergyStackWithoutParameters	CarImageLoader.carRGBAsEnergy()	Loads the RGB image of a car and wraps it in an EnergyStackWithoutParameters.