Package | Description |
---|---|
org.anchoranalysis.feature.energy |
A particular stack used in feature-calculations called a
EnergyStack together with related classes. |
org.anchoranalysis.feature.initialization |
Initialization parameters used for beans in
org.anchoranalysis.feature.bean . |
org.anchoranalysis.image.feature.input |
Image-related implementations of
FeatureInput . |
org.anchoranalysis.mpp.feature.energy.marks |
Non-bean classes pertaining to calculating energy of {org.anchoranalysis.mpp.mark.Mark}s.
|
org.anchoranalysis.mpp.feature.energy.saved |
Saved snapshots of energy-calculations.
|
org.anchoranalysis.mpp.feature.energy.scheme |
Factorized form of storing the energy during an energy-minimization optimization scheme.
|
org.anchoranalysis.mpp.feature.mark |
Non-bean classes for calculating feature-values related to
Mark s. |
org.anchoranalysis.mpp.mark.voxelized |
A mark after a voxel-representation has been inferred.
|
org.anchoranalysis.mpp.mark.voxelized.memo |
Memoization of
VoxelizedMark s. |
org.anchoranalysis.test.image.load |
Load test image data.
|
Modifier and Type | Method and Description |
---|---|
EnergyStackWithoutParameters |
EnergyStackWithoutParameters.extractSlice(int z)
Extract a particular z-slice from the
EnergyStackWithoutParameters as a new stack. |
EnergyStackWithoutParameters |
EnergyStack.withoutParameters()
The energy-stack without associated parameters.
|
Constructor and Description |
---|
EnergyStack(EnergyStackWithoutParameters energyStack)
Create from a
EnergyStackWithoutParameters without any additional parameters. |
EnergyStack(EnergyStackWithoutParameters delegate,
Dictionary parameters) |
Modifier and Type | Method and Description |
---|---|
Optional<EnergyStackWithoutParameters> |
FeatureInitialization.getEnergyStack()
An energy-stack, which may form an input to the feature for calculation.
|
Constructor and Description |
---|
FeatureInitialization(Optional<Dictionary> dictionary,
Optional<EnergyStackWithoutParameters> energyStack,
Optional<SharedObjects> sharedObjects) |
Constructor and Description |
---|
FeatureInputStack(EnergyStackWithoutParameters energyStack) |
Constructor and Description |
---|
FeatureInputStack(Optional<EnergyStackWithoutParameters> energyStack) |
Modifier and Type | Method and Description |
---|---|
void |
MarksWithEnergyBreakdown.add(EnergyMemoList wrapperInd,
VoxelizedMarkMemo newPxlMarkMemo,
EnergyStackWithoutParameters stack) |
void |
VoxelizedMarksWithEnergy.add(VoxelizedMarkMemo newPxlMark,
EnergyStackWithoutParameters stack) |
void |
MarksWithEnergyBreakdown.remove(EnergyMemoList wrapperInd,
int index,
VoxelizedMarkMemo markToRemove,
EnergyStackWithoutParameters stack) |
void |
MarksWithEnergyBreakdown.remove(EnergyMemoList wrapperInd,
VoxelizedMarkMemo markToRemove,
EnergyStackWithoutParameters stack) |
void |
VoxelizedMarksWithEnergy.remove(int index,
EnergyStackWithoutParameters stack) |
void |
VoxelizedMarksWithEnergy.remove(VoxelizedMarkMemo memoToRemove,
EnergyStackWithoutParameters stack) |
void |
MarksWithEnergyBreakdown.removeTwo(EnergyMemoList wrapperInd,
int index1,
int index2,
EnergyStackWithoutParameters energyStack) |
void |
VoxelizedMarksWithEnergy.removeTwo(int index1,
int index2,
EnergyStackWithoutParameters stack) |
void |
MarksWithEnergyBreakdown.updateTotal(EnergyMemoList pxlMarkMemoList,
EnergyStackWithoutParameters stack) |
Modifier and Type | Method and Description |
---|---|
void |
EnergySavedAll.calc(EnergyMemoList pxlMarkMemoList,
EnergySchemeWithSharedFeatures energyScheme,
EnergyStackWithoutParameters energyStack) |
Modifier and Type | Method and Description |
---|---|
Dictionary |
DictionaryForImageCreator.create(EnergyStackWithoutParameters energyStack) |
EnergyTotal |
EnergySchemeWithSharedFeatures.totalAll(EnergyMemoList pxlMarkMemoList,
EnergyStackWithoutParameters raster) |
EnergyTotal |
EnergySchemeWithSharedFeatures.totalIndividual(VoxelizedMarkMemo pmm,
EnergyStackWithoutParameters raster) |
Modifier and Type | Method and Description |
---|---|
VoxelizedMarkMemo |
EnergyMemoList.add(EnergySavedInd energySavedInd,
VoxelizedMarkMemo memo,
EnergyStackWithoutParameters stack,
EnergySchemeWithSharedFeatures energyScheme) |
VoxelizedMarkMemo |
EnergyMemoList.exchange(EnergySavedInd energySavedInd,
int index,
VoxelizedMarkMemo newMark,
EnergyStackWithoutParameters stack,
EnergySchemeWithSharedFeatures energySchemeTotal) |
Constructor and Description |
---|
EnergyMemoList(EnergySavedInd savedInd,
EnergyStackWithoutParameters energyStack,
MarkCollection marks,
EnergySchemeWithSharedFeatures energySchemeTotal) |
Modifier and Type | Method and Description |
---|---|
static VoxelizedMarkHistogram |
VoxelizedMarkFactory.create(Mark mark,
EnergyStackWithoutParameters stack,
RegionMap regionMap) |
Modifier and Type | Method and Description |
---|---|
static VoxelizedMarkMemo |
PxlMarkMemoFactory.create(Mark mark,
EnergyStackWithoutParameters stack,
RegionMap regionMap) |
Constructor and Description |
---|
VoxelizedMarkMemo(Mark mark,
EnergyStackWithoutParameters stack,
RegionMap regionMap) |
Modifier and Type | Method and Description |
---|---|
EnergyStackWithoutParameters |
CarImageLoader.carGrayscale16BitAsEnergy() |
EnergyStackWithoutParameters |
CarImageLoader.carGrayscale8BitAsEnergy() |
EnergyStackWithoutParameters |
CarImageLoader.carRGBAsEnergy() |
Copyright © 2010–2023 Owen Feehan, ETH Zurich, University of Zurich, Hoffmann-La Roche. All rights reserved.