Package | Description |
---|---|
org.anchoranalysis.image.io.channel.input |
Non-bean classes for reading a
Channel from the
filesystem. |
org.anchoranalysis.plugin.image.task.bean |
A parent package for many different kinds of tasks.
|
org.anchoranalysis.plugin.image.task.bean.format |
Tasks for converting image-formats.
|
org.anchoranalysis.plugin.image.task.bean.slice |
Tasks that process on one or more slices from a z-stack.
|
org.anchoranalysis.plugin.io.bean.file.group |
Grouping files together so that they collectively represent a single entity.
|
org.anchoranalysis.plugin.io.bean.input.stack |
Implementations of
InputManager that process Stack s. |
org.anchoranalysis.plugin.mpp.experiment.bean.convert |
Converting from
NamedChannelsInput to the
input-type expected by a Task . |
org.anchoranalysis.plugin.mpp.experiment.shared |
Shared-state use across tasks in this JAR.
|
Modifier and Type | Class and Description |
---|---|
class |
NamedChannelsInputPart
One part of a
NamedChannelsInput that can be combined with others. |
Modifier and Type | Method and Description |
---|---|
void |
RasterTask.doJobOnInput(InputBound<NamedChannelsInput,S> input) |
abstract void |
RasterTask.doStack(InputBound<NamedChannelsInput,S> input,
U sharedStateJob,
int seriesIndex,
int numberSeries,
InputOutputContext context)
Processes one stack from a series.
|
Modifier and Type | Method and Description |
---|---|
NoSharedState |
ConvertImageFormat.beforeAnyJobIsExecuted(Outputter outputter,
ConcurrencyPlan concurrencyPlan,
List<NamedChannelsInput> inputs,
ParametersExperiment parameters) |
void |
ConvertImageFormat.doStack(InputBound<NamedChannelsInput,NoSharedState> input,
OutputSequenceIndexed<Stack,String> sharedStateJob,
int seriesIndex,
int numberSeries,
InputOutputContext context) |
Modifier and Type | Method and Description |
---|---|
SharedStateSelectedSlice |
ExtractSlice.beforeAnyJobIsExecuted(Outputter outputter,
ConcurrencyPlan concurrencyPlan,
List<NamedChannelsInput> inputs,
ParametersExperiment parameters) |
void |
ExtractSlice.doJobOnInput(InputBound<NamedChannelsInput,SharedStateSelectedSlice> input) |
Modifier and Type | Method and Description |
---|---|
InputsWithDirectory<NamedChannelsInput> |
GroupFiles.inputs(InputManagerParameters parameters) |
Modifier and Type | Method and Description |
---|---|
InputManager<NamedChannelsInput> |
ConvertNamedChannelsToStack.getInput() |
Modifier and Type | Method and Description |
---|---|
void |
ConvertNamedChannelsToStack.setInput(InputManager<NamedChannelsInput> input) |
Constructor and Description |
---|
ConvertNamedChannelsInputToStack(NamedChannelsInput input,
ExecutionTimeRecorder executionTimeRecorder)
Create with an input.
|
ConvertNamedChannelsInputToStack(NamedChannelsInput input,
int timeIndex,
Optional<String> channelName,
ExecutionTimeRecorder executionTimeRecorder)
Create with an input.
|
Modifier and Type | Class and Description |
---|---|
class |
ConvertNamedChannels<T extends NamedChannelsInput,S,U extends InputFromManager>
Converts
NamedChannelsInput to a variety of others to match a delegate task. |
Modifier and Type | Method and Description |
---|---|
Optional<U> |
SharedStateRememberConverted.findConvertedInputFor(NamedChannelsInput unconverted,
MessageLogger logger)
Finds a converted-input that has been remembered.
|
void |
SharedStateRememberConverted.rememberConverted(NamedChannelsInput unconverted,
U converted,
StringBuilder loggedMesssages)
Remembers a converted input.
|
Copyright © 2010–2023 Owen Feehan, ETH Zurich, University of Zurich, Hoffmann-La Roche. All rights reserved.