org.anchoranalysis.image.io.stack.input

Interface OpenedImageFile

All Superinterfaces:

AutoCloseable

All Known Implementing Classes:

BioformatsOpenedRaster, MultiFileReaderOpenedRaster

public interface OpenedImageFile
extends AutoCloseable

An image file that has been opened for reading containing one or more series of image-Stacks.

Author:

Owen Feehan

Method Summary

Modifier and Type	Method and Description
int	bitDepth()
Optional<List<String>>	channelNames()
void	close()
Dimensions	dimensionsForSeries(int seriesIndex)
boolean	isRGB()
int	numberChannels()
int	numberFrames()
int	numberSeries()
TimeSequence	open(int seriesIndex, Progress progress) Open when we don't have a specific-type
default TimeSequence	openCheckType(int seriesIndex, Progress progress, VoxelDataType channelDataType)

Method Detail

openCheckType

default TimeSequence openCheckType(int seriesIndex,
                                   Progress progress,
                                   VoxelDataType channelDataType)
                            throws ImageIOException

Throws:

ImageIOException

open

TimeSequence open(int seriesIndex,
                  Progress progress)
           throws ImageIOException

Open when we don't have a specific-type

Throws:

ImageIOException

numberSeries

int numberSeries()

channelNames

Optional<List<String>> channelNames()
                             throws ImageIOException

Throws:

ImageIOException

numberChannels

int numberChannels()
            throws ImageIOException

Throws:

ImageIOException

numberFrames

int numberFrames()
          throws ImageIOException

Throws:

ImageIOException

bitDepth

int bitDepth()
      throws ImageIOException

Throws:

ImageIOException

isRGB

boolean isRGB()
       throws ImageIOException

Throws:

ImageIOException

close

void close()
    throws ImageIOException

Specified by:

close in interface AutoCloseable

Throws:

ImageIOException

dimensionsForSeries

Dimensions dimensionsForSeries(int seriesIndex)
                        throws ImageIOException

Throws:

ImageIOException