Uses of Class
org.anchoranalysis.image.voxel.resizer.VoxelsResizer

Packages that use VoxelsResizer

Package	Description
org.anchoranalysis.image.bean.interpolator	Beans for specifying image interpolators.
org.anchoranalysis.image.bean.spatial.arrange	Beans to specify how to form a single-image by spatially combining other images.
org.anchoranalysis.image.core.channel	The Channel core data-class and related operations and converters.
org.anchoranalysis.image.inference	Inference of machine learning models on images.
org.anchoranalysis.image.inference.segment	Non-beans pertaining to segmentation of images via model inference.
org.anchoranalysis.image.io.stack.output.box	Base classes for generators that ultimately write only a bounding-box portion of a Stack to the filesystem.
org.anchoranalysis.image.voxel	Data-structures to store and manipulate image raster-data or voxels.
org.anchoranalysis.image.voxel.extracter	Methods to read/copy/duplicate portions of voxels.
org.anchoranalysis.image.voxel.resizer	Different interpolator methods to use when scaling voxels.
org.anchoranalysis.io.imagej.bean.interpolator	Performing interpolation with ImageJ.
org.anchoranalysis.io.imagej.resizer	Image interpolation when scaling using ImageJ.
org.anchoranalysis.plugin.image.task.bean.scale	Tasks to scale an image.
org.anchoranalysis.plugin.image.task.grouped	Non-bean classes about grouping channels or other inputs.
org.anchoranalysis.plugin.image.task.slice	Non-bean classes pertaining to combining stacks into a single stack.
org.anchoranalysis.plugin.opencv.bean.interpolate	Interpolation beans that use OpenCV.
org.anchoranalysis.plugin.opencv.resizer	Interpolation non-beans that use OpenCV.

Uses of VoxelsResizer in org.anchoranalysis.image.bean.interpolator

Methods in org.anchoranalysis.image.bean.interpolator that return VoxelsResizer

Modifier and Type	Method	Description
protected VoxelsResizer	ImgLib2Lanczos.createVoxelsResizer()
protected VoxelsResizer	ImgLib2Linear.createVoxelsResizer()
protected abstract VoxelsResizer	Interpolator.createVoxelsResizer()	Create a VoxelsResizer that can be used for resizing voxel-buffers.
protected VoxelsResizer	None.createVoxelsResizer()
VoxelsResizer	Interpolator.voxelsResizer()	Memoizes a call to Interpolator.createVoxelsResizer().

Uses of VoxelsResizer in org.anchoranalysis.image.bean.spatial.arrange

Methods in org.anchoranalysis.image.bean.spatial.arrange with parameters of type VoxelsResizer

Modifier and Type	Method	Description
RGBStack	StackArranger.combine(List<RGBStack> stacks, VoxelsResizer resizer, OperationContext context)	Creates a new RGBStack of voxel data type unsigned byte that is a combination of other RGBStacks.
RGBStack	StackArranger.combine(List<RGBStack> stacks, VoxelsResizer resizer, ChannelFactorySingleType factory, OperationContext context)	Creates a new RGBStack that is a combination of other RGBStacks.

Uses of VoxelsResizer in org.anchoranalysis.image.core.channel

Methods in org.anchoranalysis.image.core.channel with parameters of type VoxelsResizer

Modifier and Type	Method	Description
Channel	Channel.resizeXY(int x, int y, VoxelsResizer resizer)	Like Channel.resizeXY(Extent, VoxelsResizer) but specifies the size via int parameters.
Channel	Channel.resizeXY(Extent extentToAssign, VoxelsResizer resizer)	Resizes the dimensions of the channel, interpolating the existing voxel values to match.
Channel	Channel.scaleXY(ScaleFactor scaleFactor, VoxelsResizer resizer)	Resizes the dimensions of the channel, by scaling the existing size by a factor.

Uses of VoxelsResizer in org.anchoranalysis.image.inference

Methods in org.anchoranalysis.image.inference that return VoxelsResizer

Modifier and Type	Method	Description
VoxelsResizer	ImageInferenceContext.getResizer()	How to resize images or voxel-buffers.

Constructors in org.anchoranalysis.image.inference with parameters of type VoxelsResizer

Modifier	Constructor	Description
	ImageInferenceContext(DualScale<Dimensions> dimensions, ScaleFactor scaleFactor, Optional<List<String>> classLabels, VoxelsResizer resizer, ExecutionTimeRecorder executionTimeRecorder, Logger logger)	Creates a new ImageInferenceContext instance.

Uses of VoxelsResizer in org.anchoranalysis.image.inference.segment

Methods in org.anchoranalysis.image.inference.segment with parameters of type VoxelsResizer

Modifier and Type	Method	Description
static BinaryVoxels<UnsignedByteBuffer>	ScaleAndThresholdVoxels.scaleAndThreshold(Voxels<FloatBuffer> voxels, Extent targetSize, VoxelsResizer resizer, float maskMinValue)	Scales voxels representing a mask to a target size, and then thresholds.

Uses of VoxelsResizer in org.anchoranalysis.image.io.stack.output.box

Methods in org.anchoranalysis.image.io.stack.output.box with parameters of type VoxelsResizer

Modifier and Type	Method	Description
static ScaleableBackground	ScaleableBackground.scaleBy(DisplayStack stack, ScaleFactor scaleFactor, VoxelsResizer resizer)	Creates a background from a stack with scaling.

Uses of VoxelsResizer in org.anchoranalysis.image.voxel

Methods in org.anchoranalysis.image.voxel with parameters of type VoxelsResizer

Modifier and Type	Method	Description
BoundedVoxels<T>	BoundedVoxels.scale(ScaleFactor scaleFactor, VoxelsResizer resizer, Optional<Extent> clipTo)	Creates a scaled-version (in XY dimensions only) of the current bounding-box.

Uses of VoxelsResizer in org.anchoranalysis.image.voxel.extracter

Methods in org.anchoranalysis.image.voxel.extracter with parameters of type VoxelsResizer

Modifier and Type	Method	Description
Voxels<T>	VoxelsExtracter.resizedXY(int sizeX, int sizeY, VoxelsResizer resizer)	Creates a new voxels that are a resized version of the current voxels (only in X and Y dimensions), interpolating as needed.

Uses of VoxelsResizer in org.anchoranalysis.image.voxel.resizer

Subclasses of VoxelsResizer in org.anchoranalysis.image.voxel.resizer

Modifier and Type	Class	Description
class	Lanczos	Resizes with an interpolator that uses Lanczos resampling as implemented in Imglib2.
class	Linear	Resizes with an interpolator that uses linear interpolation as implemented in Imglib2.
class	NearestNeighbor	Resizes with an interpolator that uses nearest neighbor interpolation as implemented in Imglib2.
class	VoxelsResizerExecutionTime	Calls another VoxelsResizer recording each resize call via a ExecutionTimeRecorder.
class	VoxelsResizerImgLib2	Performs resizing of VoxelBuffers using ImgLib2's interpolation.
class	VoxelsResizerNone	Doesn't do any interpolation, just copies a single value for each voxel.

Methods in org.anchoranalysis.image.voxel.resizer that return VoxelsResizer

Modifier and Type	Method	Description
VoxelsResizer	VoxelsResizerFactory.binaryResizer(int outOfBoundsValue)	A VoxelsResizer that is suitable for resizing a binary raster-image, restricted to two possible intensity values only.
VoxelsResizer	VoxelsResizerFactory.noInterpolation()	A VoxelsResizer that is effectively disabled, and performs no interpolation, copying a single (minimal corner) value for each voxel.

Constructors in org.anchoranalysis.image.voxel.resizer with parameters of type VoxelsResizer

Modifier	Constructor	Description
	VoxelsResizerExecutionTime(VoxelsResizer resizer, ExecutionTimeRecorder executionTimeRecorder, String operationIdentifierPrefix)	Creates with an VoxelsResizer and ExecutionTimeRecorder.

Uses of VoxelsResizer in org.anchoranalysis.io.imagej.bean.interpolator

Methods in org.anchoranalysis.io.imagej.bean.interpolator that return VoxelsResizer

Modifier and Type	Method	Description
protected VoxelsResizer	ImageJ.createVoxelsResizer()

Uses of VoxelsResizer in org.anchoranalysis.io.imagej.resizer

Subclasses of VoxelsResizer in org.anchoranalysis.io.imagej.resizer

Modifier and Type	Class	Description
class	VoxelsResizerImageJ	Resizes with linear interpolation as implemented in ImageJ.

Uses of VoxelsResizer in org.anchoranalysis.plugin.image.task.bean.scale

Methods in org.anchoranalysis.plugin.image.task.bean.scale with parameters of type VoxelsResizer

Modifier and Type	Method	Description
protected abstract Stack	ScaleImage.scaleStack(Stack stack, Optional<ImageSizeSuggestion> suggestedSize, VoxelsResizer voxelsResizer, S sharedState)	Produce a scaled version of a Stack, mapping each channel to a scaled version of itself.
protected Stack	ScaleImageCommonSize.scaleStack(Stack stack, Optional<ImageSizeSuggestion> suggestedSize, VoxelsResizer voxelsResizer, CommonSize sharedState)
protected Stack	ScaleImageIndependently.scaleStack(Stack stack, Optional<ImageSizeSuggestion> suggestedSize, VoxelsResizer voxelsResizer, NoSharedState sharedState)

Uses of VoxelsResizer in org.anchoranalysis.plugin.image.task.grouped

Constructors in org.anchoranalysis.plugin.image.task.grouped with parameters of type VoxelsResizer

Modifier	Constructor	Description
	ChannelSource(NamedStacks stackStore, ConsistentChannelChecker channelChecker, Optional<SizeXY> resizeTo, VoxelsResizer resizer)	Creates a new ChannelSource instance.

Uses of VoxelsResizer in org.anchoranalysis.plugin.image.task.slice

Constructors in org.anchoranalysis.plugin.image.task.slice with parameters of type VoxelsResizer

Modifier	Constructor	Description
	MontageSharedState(Map<Path,BoundingBoxEnclosed> boxes, Extent sizeCombined, VoxelsResizer resizer, ExecutionTimeRecorder executionTimeRecorder)	Create with a mapping from Paths to boxes.

Uses of VoxelsResizer in org.anchoranalysis.plugin.opencv.bean.interpolate

Methods in org.anchoranalysis.plugin.opencv.bean.interpolate that return VoxelsResizer

Modifier and Type	Method	Description
protected VoxelsResizer	OpenCV.createVoxelsResizer()

Uses of VoxelsResizer in org.anchoranalysis.plugin.opencv.resizer

Subclasses of VoxelsResizer in org.anchoranalysis.plugin.opencv.resizer

Modifier and Type	Class	Description
class	VoxelsResizerOpenCV	Resizes VoxelBuffers using OpenCV's cv2.resize function.