Uses of Class
org.anchoranalysis.mpp.bean.MarksBean

Packages that use MarksBean

Package	Description
org.anchoranalysis.mpp.bean.proposer	Proposing Marks or other data-structures with particular attributes.
org.anchoranalysis.mpp.bean.provider	Implementations of Provider involving Marks.
org.anchoranalysis.plugin.mpp.bean.provider.collection	Implementation of MarkCollectionProvider.
org.anchoranalysis.plugin.points.bean	Beans that fit or otherwise manipulate sets of points.

Uses of MarksBean in org.anchoranalysis.mpp.bean.proposer

Subclasses of MarksBean in org.anchoranalysis.mpp.bean.proposer

Modifier and Type	Class	Description
class	MarkCollectionProposer	An abstract base class for proposing an entire collection (configuration) of marks.
class	MarkFromCollectionProposer	An abstract base class for proposing a selection of a single mark from a collection of marks.
class	MarkMergeProposer	An abstract base class for proposing merges between marks.
class	MarkProposer	An abstract base class for proposing changes to a mark.
class	MarkSplitProposer	An abstract base class for proposing splits of a mark into two new marks.
class	OrientationProposer	An abstract base class for proposing orientations for marks.
class	PositionProposer	An abstract base class for proposing positions.
class	ProposerBean<T>	An abstract base class for proposer beans in the MPP (Marked Point Process) framework.
class	RadiiProposer	An abstract base class for proposing radii in a 3D space.

Uses of MarksBean in org.anchoranalysis.mpp.bean.provider

Subclasses of MarksBean in org.anchoranalysis.mpp.bean.provider

Modifier and Type	Class	Description
class	MarkBoundsProvider	An abstract provider for MarkBounds.
class	MarkCollectionProvider	Provides a collection of marks
class	MarksBaseProvider<T,S>	Base class for MarksBean that implements Provider to provide an object of type S.
class	SingleMarkProvider	Provides (maybe) a single mark

Uses of MarksBean in org.anchoranalysis.plugin.mpp.bean.provider.collection

Subclasses of MarksBean in org.anchoranalysis.plugin.mpp.bean.provider.collection

Modifier and Type	Class	Description
class	CreateNew	Creates a new empty collection of marks
class	FromSingleMark	Creates a MarkCollection from a single mark provided by a SingleMarkProvider.
class	PointsFromObjects	Creates a MarkCollection of point marks from an ObjectCollection.
class	Reference	Provides a MarkCollection by referencing it from the initialization context using an ID.
class	ReferenceOrEmpty	Returns an existing marks-collection or an empty set if it doesn't exist
class	ScaleXY	Scales the X and Y coordinates of marks in a MarkCollection using a ScaleCalculator.

Uses of MarksBean in org.anchoranalysis.plugin.points.bean

Subclasses of MarksBean in org.anchoranalysis.plugin.points.bean

Modifier and Type	Class	Description
class	FitPoints	A MarkProposer that fits points to a mark using a PointsProposer and a PointsFitter.
class	FitPointsFromObjects	A MarkCollectionProvider that fits points from objects to create marks.