Package | Description |
---|---|
org.anchoranalysis.annotation.mark |
Annotations that use one or more marks to describe entities in an image.
|
org.anchoranalysis.mpp.bean.regionmap |
Voxel subregions of
Mark s. |
org.anchoranalysis.mpp.io.marks.generator | |
org.anchoranalysis.mpp.mark |
Non-bean classes related to
Mark s. |
org.anchoranalysis.mpp.overlay | |
org.anchoranalysis.plugin.mpp.feature.overlap |
Implementations of
CalculationPart to calculate
overlap between two entities. |
Modifier and Type | Method and Description |
---|---|
RegionMembershipWithFlags |
AnnotationWithMarks.region()
The region(s) of the marks that specifies the annotation.
|
RegionMembershipWithFlags |
DualMarksAnnotation.region() |
Modifier and Type | Method and Description |
---|---|
RegionMembershipWithFlags |
RegionMap.membershipWithFlagsForIndex(int index) |
Modifier and Type | Method and Description |
---|---|
List<RegionMembershipWithFlags> |
RegionMap.createListMembershipWithFlags() |
Constructor and Description |
---|
MarksAsUniqueValueGenerator(Dimensions dimensions,
RegionMembershipWithFlags regionMembership) |
MarksFlattenedGenerator(DrawObject drawObject,
IdentifierGetter<Overlay> idGetter,
RegionMembershipWithFlags regionMembership) |
MarksGenerator(DrawObject drawObject,
IdentifierGetter<Overlay> idGetter,
RegionMembershipWithFlags regionMembership) |
MarksGeneratorBase(DrawOverlay writer,
IdentifierGetter<Overlay> idGetter,
RegionMembershipWithFlags regionMembership) |
Modifier and Type | Method and Description |
---|---|
ObjectMask |
Mark.deriveObject(Dimensions dimensions,
RegionMembershipWithFlags region,
BinaryValuesByte binaryValues)
Create a
ObjectMask representation of the Mark . |
ObjectCollection |
MarkCollection.deriveObjects(Dimensions dimensions,
RegionMembershipWithFlags regionMembership) |
Constructor and Description |
---|
MarkToObjectConverter(Optional<ScaleFactor> scaleFactor,
Dimensions dimensions,
RegionMembershipWithFlags regionMembership,
BinaryValuesByte binaryValuesOut) |
Modifier and Type | Method and Description |
---|---|
static ColoredOverlayCollection |
OverlayCollectionMarkFactory.createColor(ColoredMarks marks,
RegionMembershipWithFlags regionMembership) |
static OverlayCollection |
OverlayCollectionMarkFactory.createWithoutColor(MarkCollection marks,
RegionMembershipWithFlags regionMembership) |
Constructor and Description |
---|
OverlayMark(Mark mark,
RegionMembershipWithFlags regionMembership) |
Constructor and Description |
---|
MaxIntensityProjectionPair(BoundedVoxels<UnsignedByteBuffer> voxels1,
BoundedVoxels<UnsignedByteBuffer> voxels2,
RegionMembershipWithFlags rmFlags1,
RegionMembershipWithFlags rmFlags2) |
Copyright © 2010–2023 Owen Feehan, ETH Zurich, University of Zurich, Hoffmann-La Roche. All rights reserved.