Package | Description |
---|---|
org.anchoranalysis.mpp.feature.energy.marks |
Non-bean classes pertaining to calculating energy of {org.anchoranalysis.mpp.mark.Mark}s.
|
org.anchoranalysis.mpp.feature.energy.saved |
Saved snapshots of energy-calculations.
|
org.anchoranalysis.mpp.feature.mark |
Non-bean classes for calculating feature-values related to
Mark s. |
org.anchoranalysis.mpp.segment.optimization |
Non-bean classes used in
org.anchoranalysis.mpp.segment.bean.optimization |
org.anchoranalysis.mpp.segment.optimization.kernel |
Non-bean classes used in
org.anchoranalysis.mpp.segment.bean.optimization.kernel |
Modifier and Type | Method and Description |
---|---|
EnergySchemeWithSharedFeatures |
VoxelizedMarksWithEnergy.getEnergyScheme() |
EnergySchemeWithSharedFeatures |
MarksWithEnergyBreakdown.getEnergyScheme() |
EnergySchemeWithSharedFeatures |
MarksWithTotalEnergy.getEnergyScheme()
Associated Energy Scheme, which should include the EnergySavedPairs
|
Constructor and Description |
---|
MarksWithTotalEnergy(MarkCollection marks,
EnergySchemeWithSharedFeatures energyScheme) |
Modifier and Type | Method and Description |
---|---|
void |
EnergySavedAll.calc(EnergyMemoList pxlMarkMemoList,
EnergySchemeWithSharedFeatures energyScheme,
EnergyStackWithoutParameters energyStack) |
Modifier and Type | Method and Description |
---|---|
VoxelizedMarkMemo |
EnergyMemoList.add(EnergySavedInd energySavedInd,
VoxelizedMarkMemo memo,
EnergyStackWithoutParameters stack,
EnergySchemeWithSharedFeatures energyScheme) |
VoxelizedMarkMemo |
EnergyMemoList.exchange(EnergySavedInd energySavedInd,
int index,
VoxelizedMarkMemo newMark,
EnergyStackWithoutParameters stack,
EnergySchemeWithSharedFeatures energySchemeTotal) |
Constructor and Description |
---|
EnergyMemoList(EnergySavedInd savedInd,
EnergyStackWithoutParameters energyStack,
MarkCollection marks,
EnergySchemeWithSharedFeatures energySchemeTotal) |
Modifier and Type | Method and Description |
---|---|
EnergySchemeWithSharedFeatures |
OptimizationContext.getEnergyScheme() |
Constructor and Description |
---|
OptimizationContext(String experimentDescription,
EnergySchemeWithSharedFeatures energyScheme,
DualStack dualStack,
TriggerTerminationCondition triggerTerminationCondition,
InputOutputContext inputOutputContext,
RandomNumberGenerator randomNumberGenerator,
MarkWithIdentifierFactory markFactory) |
Modifier and Type | Method and Description |
---|---|
EnergySchemeWithSharedFeatures |
KernelCalculationContext.getEnergyScheme() |
Constructor and Description |
---|
KernelCalculationContext(MarkFactoryContext markFactoryContext,
EnergyStack energyStack,
EnergySchemeWithSharedFeatures energyScheme,
RandomNumberGenerator randomNumberGenerator,
ErrorNode errorNode) |
Copyright © 2010–2023 Owen Feehan, ETH Zurich, University of Zurich, Hoffmann-La Roche. All rights reserved.