Uses of Class
org.anchoranalysis.mpp.feature.mark.EnergyMemoList

Packages that use EnergyMemoList

Package	Description
org.anchoranalysis.mpp.feature.energy.marks	Non-bean classes pertaining to calculating energy of {org.anchoranalysis.mpp.mark.Mark}s.
org.anchoranalysis.mpp.feature.energy.saved	Saved snapshots of energy-calculations.
org.anchoranalysis.mpp.feature.energy.scheme	Factorized form of storing the energy during an energy-minimization optimization scheme.
org.anchoranalysis.mpp.feature.input	Inputs to mark-point-processes related Features.
org.anchoranalysis.mpp.feature.mark	Non-bean classes for calculating feature-values related to Marks.

Uses of EnergyMemoList in org.anchoranalysis.mpp.feature.energy.marks

Methods in org.anchoranalysis.mpp.feature.energy.marks with parameters of type EnergyMemoList

Modifier and Type	Method	Description
void	MarksWithEnergyBreakdown.add(EnergyMemoList wrapperInd, VoxelizedMarkMemo newPxlMarkMemo, EnergyStackWithoutParameters stack)	Adds a new mark to the collection and updates energies.
void	MarksWithEnergyBreakdown.exchange(EnergyMemoList wrapperInd, int index, VoxelizedMarkMemo newMark, EnergyStack energyStack)	Exchanges a mark at a specific index with a new mark and updates energies.
void	MarksWithEnergyBreakdown.remove(EnergyMemoList wrapperInd, int index, VoxelizedMarkMemo markToRemove, EnergyStackWithoutParameters stack)	Removes a mark at a specific index from the collection and updates energies.
void	MarksWithEnergyBreakdown.remove(EnergyMemoList wrapperInd, VoxelizedMarkMemo markToRemove, EnergyStackWithoutParameters stack)	Removes a specific mark from the collection and updates energies.
void	MarksWithEnergyBreakdown.removeTwo(EnergyMemoList wrapperInd, int index1, int index2, EnergyStackWithoutParameters energyStack)	Removes two marks at specific indices from the collection and updates energies.
void	MarksWithEnergyBreakdown.updateTotal(EnergyMemoList pxlMarkMemoList, EnergyStackWithoutParameters stack)	Updates the total energy based on the current state.

Uses of EnergyMemoList in org.anchoranalysis.mpp.feature.energy.saved

Methods in org.anchoranalysis.mpp.feature.energy.saved with parameters of type EnergyMemoList

Modifier and Type	Method	Description
void	EnergySavedAll.calc(EnergyMemoList memoList, EnergySchemeWithSharedFeatures energyScheme, EnergyStackWithoutParameters energyStack)	Calculates the total energy for all items using the provided energy scheme and stack.

Uses of EnergyMemoList in org.anchoranalysis.mpp.feature.energy.scheme

Methods in org.anchoranalysis.mpp.feature.energy.scheme with parameters of type EnergyMemoList

Modifier and Type	Method	Description
EnergyTotal	EnergySchemeWithSharedFeatures.totalAll(EnergyMemoList pxlMarkMemoList, EnergyStackWithoutParameters raster)	Calculates the total energy for all marks in the list.

Uses of EnergyMemoList in org.anchoranalysis.mpp.feature.input

Methods in org.anchoranalysis.mpp.feature.input that return EnergyMemoList

Modifier and Type	Method	Description
EnergyMemoList	FeatureInputAllMemo.getCalculations()	The list of memoized energy calculations for all marks.

Methods in org.anchoranalysis.mpp.feature.input with parameters of type EnergyMemoList

Modifier and Type	Method	Description
void	FeatureInputAllMemo.setCalculations(EnergyMemoList calculations)	The list of memoized energy calculations for all marks.

Constructors in org.anchoranalysis.mpp.feature.input with parameters of type EnergyMemoList

Modifier	Constructor	Description
	FeatureInputAllMemo(EnergyMemoList pxlMarkMemoList, EnergyStack raster)	Creates a new instance with a list of memoized energy calculations and an energy stack.

Uses of EnergyMemoList in org.anchoranalysis.mpp.feature.mark

Constructors in org.anchoranalysis.mpp.feature.mark with parameters of type EnergyMemoList

Modifier	Constructor	Description
	EnergyMemoList(EnergyMemoList source)	Creates a copy of an existing energy memo list.