Uses of Class
org.anchoranalysis.overlay.collection.OverlayCollection

Packages that use OverlayCollection

Package	Description
org.anchoranalysis.mpp.overlay	Any Overlay related to a Mark.
org.anchoranalysis.overlay.collection	Collections of Overlays.

Uses of OverlayCollection in org.anchoranalysis.mpp.overlay

Methods in org.anchoranalysis.mpp.overlay that return OverlayCollection

Modifier and Type	Method	Description
static OverlayCollection	OverlayCollectionMarkFactory.createWithoutColor(MarkCollection marks, RegionMembershipWithFlags regionMembership)	Creates an OverlayCollection from a MarkCollection without color information.

Methods in org.anchoranalysis.mpp.overlay with parameters of type OverlayCollection

Modifier and Type	Method	Description
static MarkCollection	OverlayCollectionMarkFactory.marksFromOverlays(OverlayCollection overlays)	Creates a MarkCollection from an OverlayCollection.

Uses of OverlayCollection in org.anchoranalysis.overlay.collection

Methods in org.anchoranalysis.overlay.collection that return OverlayCollection

Modifier and Type	Method	Description
OverlayCollection	ColoredOverlayCollection.getOverlays()	The collection of overlays, each element corresponding to colors.

Constructors in org.anchoranalysis.overlay.collection with parameters of type OverlayCollection

Modifier	Constructor	Description
	ColoredOverlayCollection(OverlayCollection overlays, ColorList colors)	Creates a new ColoredOverlayCollection instance.