Package org.anchoranalysis.plugin.image.feature.bean.dimensions

Class VoxelPhysicalSize<T extends FeatureInputEnergy>

Object

AnchorBean<Feature<T>>

InitializableBean<Feature<T>,FeatureInitialization>

Feature<T>

FromDimensionsBase<T>

ForSpecificAxis<T>

VoxelPhysicalSize<T>

Type Parameters:

T - feature-input-type

public class VoxelPhysicalSize<T extends FeatureInputEnergy>
extends ForSpecificAxis<T>

The physical size of a pixel in a specific dimension.

Author:

Owen Feehan

Constructor Summary

Constructors

Constructor	Description
VoxelPhysicalSize()

Method Summary

Modifier and Type	Method	Description
protected double	calculateForAxis(Dimensions dimensions, Axis axis)	Calculates a feature value for a specific axis of the given dimensions.
boolean	isAcceptMissingResolution()	Whether to throw an exception (if true) if image-resolution is missing, or return Double.Nan (if false).
void	setAcceptMissingResolution(boolean acceptMissingResolution)	Whether to throw an exception (if true) if image-resolution is missing, or return Double.Nan (if false).

Methods inherited from class org.anchoranalysis.plugin.image.feature.bean.dimensions.ForSpecificAxis

calculateFromDimensions, describeParameters, getAxis, setAxis

Methods inherited from class org.anchoranalysis.plugin.image.feature.bean.dimensions.FromDimensionsBase

calculate, inputType

Methods inherited from class org.anchoranalysis.feature.bean.Feature

assignTo, beforeCalc, calculateCheckInitialized, castAs, createListChildFeatures, describeBean, descriptionLong, duplicateChangeName, getCustomName, getFriendlyName, onInitialization, setCustomName, toString

Methods inherited from class org.anchoranalysis.bean.initializable.InitializableBean

getInitialization, getLogger, getPropertyInitializer, initialize, initializeRecursive, initRecursiveWithInitializer, isInitialized

Methods inherited from class org.anchoranalysis.bean.AnchorBean

checkMisconfigured, describeChildren, duplicateBean, fields, findFieldsOfClass, getBeanName, getLocalPath, localise

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Details

VoxelPhysicalSize

public VoxelPhysicalSize()

Method Details

calculateForAxis

protected double calculateForAxis(Dimensions dimensions,
 Axis axis)
                           throws FeatureCalculationException

Description copied from class: ForSpecificAxis

Calculates a feature value for a specific axis of the given dimensions.

Specified by:

calculateForAxis in class ForSpecificAxis<T extends FeatureInputEnergy>

Parameters:

dimensions - the Dimensions to calculate from

axis - the Axis to perform the calculation on

Returns:

the calculated feature value

Throws:

FeatureCalculationException - if the calculation fails

isAcceptMissingResolution

public boolean isAcceptMissingResolution()

Whether to throw an exception (if true) if image-resolution is missing, or return Double.Nan (if false).

setAcceptMissingResolution

public void setAcceptMissingResolution(boolean acceptMissingResolution)

Whether to throw an exception (if true) if image-resolution is missing, or return Double.Nan (if false).