Package org.anchoranalysis.plugin.image.feature.bean.shared.object

Class QuantileAcrossObjects<T extends FeatureInputEnergy>

Object

AnchorBean<Feature<T>>

InitializableBean<Feature<T>,FeatureInitialization>

Feature<T>

FeatureEnergy<T>

FeatureSingleObjectFromShared<T>

ObjectAggregationBase<T>

QuantileAcrossObjects<T>

Type Parameters:

T - feature-input

public class QuantileAcrossObjects<T extends FeatureInputEnergy>
extends ObjectAggregationBase<T>

Calculates the quantile of a feature applied to each connected component

Author:

Owen Feehan

Constructor Summary

Constructors

Constructor	Description
QuantileAcrossObjects()

Method Summary

Modifier and Type	Method	Description
protected double	deriveStatistic(cern.colt.list.DoubleArrayList featureVals)	Derives a statistic from the calculated feature values for all objects.
double	getQuantile()
void	setQuantile(double quantile)

Methods inherited from class org.anchoranalysis.plugin.image.feature.bean.shared.object.ObjectAggregationBase

beforeCalcWithInitialization, calc, getObjects, setObjects

Methods inherited from class org.anchoranalysis.plugin.image.feature.bean.shared.object.FeatureSingleObjectFromShared

beforeCalc, calculate, getItem, inputType, setItem

Methods inherited from class org.anchoranalysis.feature.bean.Feature

assignTo, calculateCheckInitialized, castAs, createListChildFeatures, describeBean, describeParameters, descriptionLong, duplicateChangeName, getCustomName, getFriendlyName, onInitialization, setCustomName, toString

Methods inherited from class org.anchoranalysis.bean.initializable.InitializableBean

getInitialization, getLogger, getPropertyInitializer, initialize, initializeRecursive, initRecursiveWithInitializer, isInitialized

Methods inherited from class org.anchoranalysis.bean.AnchorBean

checkMisconfigured, describeChildren, duplicateBean, fields, findFieldsOfClass, getBeanName, getLocalPath, localise

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Details

QuantileAcrossObjects

public QuantileAcrossObjects()

Method Details

deriveStatistic

protected double deriveStatistic(cern.colt.list.DoubleArrayList featureVals)

Description copied from class: ObjectAggregationBase

Derives a statistic from the calculated feature values for all objects.

Specified by:

deriveStatistic in class ObjectAggregationBase<T extends FeatureInputEnergy>

Parameters:

featureVals - the list of feature values for all objects

Returns:

the derived statistic

getQuantile

public double getQuantile()

setQuantile

public void setQuantile(double quantile)