Package org.anchoranalysis.plugin.image.task.bean.grouped.selectchannels

Class All

Object

AnchorBean<FromStacks>

FromStacks

All

public class All
extends FromStacks

Selects all possible channels from all possible stacks

If a stack has a single-channel, it it uses this name as an output If a stack has multiple channels, this name is used but suffixed with a number of each channel (00, 01 etc.)

Author:

Owen Feehan

Constructor Summary

Constructors

Constructor	Description
All()

Method Summary

Modifier and Type	Method	Description
NamedChannels	selectChannels(ChannelSource source, boolean checkType)	Takes a stack-collection and extracts a set of references to particular channels (each with a name).

Methods inherited from class org.anchoranalysis.bean.AnchorBean

checkMisconfigured, describeBean, describeChildren, duplicateBean, fields, findFieldsOfClass, getBeanName, getLocalPath, localise, toString

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Details

All

public All()

Method Details

selectChannels

public NamedChannels selectChannels(ChannelSource source,
 boolean checkType)
                             throws OperationFailedException

Description copied from class: FromStacks

Takes a stack-collection and extracts a set of references to particular channels (each with a name).

Specified by:

selectChannels in class FromStacks

Parameters:

source - the ChannelSource containing the stacks to select from

checkType - whether to check the type of the channels

Returns:

a NamedChannels object containing the selected channels

Throws:

OperationFailedException - if the channel selection operation fails