Package org.anchoranalysis.plugin.image.task.bean.grouped.selectchannels

Class FromStacks

Object

AnchorBean<FromStacks>

FromStacks

Direct Known Subclasses:

All, One, SpecificAndRename

public abstract class FromStacks
extends AnchorBean<FromStacks>

Selects a subset of channels from a set of stacks.

Constructor Summary

Constructors

Constructor	Description
FromStacks()

Method Summary

Modifier and Type	Method	Description
abstract NamedChannels	selectChannels(ChannelSource source, boolean checkType)	Takes a stack-collection and extracts a set of references to particular channels (each with a name).

Methods inherited from class org.anchoranalysis.bean.AnchorBean

checkMisconfigured, describeBean, describeChildren, duplicateBean, fields, findFieldsOfClass, getBeanName, getLocalPath, localise, toString

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Details

FromStacks

public FromStacks()

Method Details

selectChannels

public abstract NamedChannels selectChannels(ChannelSource source,
 boolean checkType)
                                      throws OperationFailedException

Takes a stack-collection and extracts a set of references to particular channels (each with a name).

Parameters:

source - the ChannelSource containing the stacks to select from

checkType - whether to check the type of the channels

Returns:

a NamedChannels object containing the selected channels

Throws:

OperationFailedException - if the channel selection operation fails