Package org.anchoranalysis.plugin.io.bean.input.stack

Class Stacks

Object

AnchorBean<InputManager<StackSequenceInput>>

InputManager<StackSequenceInput>

InputManagerWithStackReader<StackSequenceInput>

Stacks

public class Stacks
extends InputManagerWithStackReader<StackSequenceInput>

An InputManager where each file provides one or more Stacks.

Specifically, each file provides either a single Stack or a time-series of Stack.

Author:

Owen Feehan

Constructor Summary

Constructors

Constructor	Description
Stacks()
Stacks(InputManager<FileInput> fileInput)

Method Summary

Modifier and Type	Method	Description
InputManager<FileInput>	getFileInput()
InputsWithDirectory<StackSequenceInput>	inputs(InputManagerParameters parameters)	Creates a list of inputs given particular parameters.
boolean	isUseLastSeriesIndexOnly()
void	setFileInput(InputManager<FileInput> fileInput)
void	setUseLastSeriesIndexOnly(boolean useLastSeriesIndexOnly)

Methods inherited from class org.anchoranalysis.image.io.bean.stack.reader.InputManagerWithStackReader

getStackReader, setStackReader

Methods inherited from class org.anchoranalysis.bean.AnchorBean

checkMisconfigured, describeBean, describeChildren, duplicateBean, fields, findFieldsOfClass, getBeanName, getLocalPath, localise, toString

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Details

Stacks

public Stacks(InputManager<FileInput> fileInput)

Stacks

public Stacks()

Method Details

inputs

public InputsWithDirectory<StackSequenceInput> inputs(InputManagerParameters parameters)
                                               throws InputReadFailedException

Description copied from class: InputManager

Creates a list of inputs given particular parameters.

Specified by:

inputs in class InputManager<StackSequenceInput>

Parameters:

parameters - the parameters.

Returns:

the list of inputs, together with any associated parent directory.

Throws:

InputReadFailedException - if inputs cannot be successfully read from the file-system.

getFileInput

public InputManager<FileInput> getFileInput()

setFileInput

public void setFileInput(InputManager<FileInput> fileInput)

isUseLastSeriesIndexOnly

public boolean isUseLastSeriesIndexOnly()

setUseLastSeriesIndexOnly

public void setUseLastSeriesIndexOnly(boolean useLastSeriesIndexOnly)