Package | Description |
---|---|
org.anchoranalysis.image.io.channel.input |
Non-bean classes for reading a
Channel from the
filesystem. |
org.anchoranalysis.image.io.channel.map |
Non-bean classes for a mapping of names to
Channel s. |
org.anchoranalysis.image.io.stack.input |
Non-bean classes for reading a
Stack from the
filesystem. |
org.anchoranalysis.image.io.stack.time |
A time-sequence of
Stack s. |
org.anchoranalysis.mpp.io.input |
Non-beans for reading data structures related to marked point processes from the file system.
|
org.anchoranalysis.plugin.io.bean.input.stack |
Implementations of
InputManager that process Stack s. |
org.anchoranalysis.plugin.io.multifile |
Non-bean classes to help use multiple files to represent a single
Stack . |
org.anchoranalysis.plugin.io.multifile.buffer |
Buffers used in
org.anchoranalysis.plugin.io.multifile . |
Modifier and Type | Method and Description |
---|---|
void |
NamedChannelsInput.addToStoreInferNames(NamedProviderStore<TimeSeries> stacks,
int seriesIndex,
Logger logger) |
void |
NamedChannelsInput.addToStoreWithName(String name,
NamedProviderStore<TimeSeries> stacks,
int seriesIndex,
Logger logger) |
Modifier and Type | Method and Description |
---|---|
void |
OpenedNamedChannels.addAsSeparateChannels(NamedProviderStore<TimeSeries> destination,
int timeIndex,
Logger logger) |
void |
NamedChannelsConcatenate.addAsSeparateChannels(NamedProviderStore<TimeSeries> stackCollection,
int timeIndex,
Logger logger) |
void |
NamedChannelsMap.addAsSeparateChannels(NamedProviderStore<TimeSeries> destination,
int timeIndex,
Logger logger)
|
Modifier and Type | Method and Description |
---|---|
TimeSeries |
StackSequenceInput.createStackSequenceForSeries(int seriesIndex,
Logger logger)
Creates a supplier of a
TimeSeries of stacks for a particular series number. |
TimeSeries |
OpenedImageFile.open(int seriesIndex,
Logger logger)
Open when we don't have a specific-type.
|
default TimeSeries |
OpenedImageFile.open(Logger logger)
Open the first series when we don't have a specific-type.
|
default TimeSeries |
OpenedImageFile.openCheckType(int seriesIndex,
VoxelDataType channelDataType,
Logger logger)
Opens a time-series, and checks that it is a particular type.
|
Modifier and Type | Method and Description |
---|---|
void |
ProvidesStackInput.addToStoreInferNames(NamedProviderStore<TimeSeries> stacks,
int seriesIndex,
Logger logger)
Adds any stacks exposed by the current element to a named-store of stacks - inferring the
names of the
Stack s. |
void |
ProvidesStackInput.addToStoreWithName(String name,
NamedProviderStore<TimeSeries> stacks,
int seriesIndex,
Logger logger)
Adds any stacks exposed by the current element to a named-store of stacks - with a particular
name.
|
Modifier and Type | Method and Description |
---|---|
Optional<TimeSeries> |
ExtractFrameStore.getOptional(String key) |
Modifier and Type | Method and Description |
---|---|
void |
ExtractFrameStore.add(String identifier,
StoreSupplier<TimeSeries> supplier) |
Modifier and Type | Method and Description |
---|---|
StoreSupplier<TimeSeries> |
StackWithMap.get(String name) |
MultiInputSubMap<TimeSeries> |
MultiInput.stack() |
Modifier and Type | Method and Description |
---|---|
void |
StackWithMap.add(String name,
StoreSupplier<TimeSeries> op) |
void |
StackWithMap.addToStore(NamedProviderStore<TimeSeries> stackCollection,
int seriesNum,
Logger logger) |
void |
StackWithMap.addToStore(NamedProviderStore<TimeSeries> stackCollection,
Logger logger) |
void |
MultiInput.addToStoreInferNames(NamedProviderStore<TimeSeries> stacks,
int seriesIndex,
Logger logger) |
void |
MultiInput.addToStoreWithName(String name,
NamedProviderStore<TimeSeries> stacks,
int seriesIndex,
Logger logger) |
Modifier and Type | Method and Description |
---|---|
TimeSeries |
ConvertNamedChannelsInputToStack.createStackSequenceForSeries(int seriesIndex,
Logger logger) |
Modifier and Type | Method and Description |
---|---|
void |
ConvertNamedChannelsInputToStack.addToStoreInferNames(NamedProviderStore<TimeSeries> stacks,
int seriesIndex,
Logger logger) |
void |
ConvertNamedChannelsInputToStack.addToStoreWithName(String name,
NamedProviderStore<TimeSeries> stacks,
int seriesIndex,
Logger logger) |
Modifier and Type | Method and Description |
---|---|
TimeSeries |
OpenedMultiFile.open(int seriesIndex,
Logger logger) |
Modifier and Type | Method and Description |
---|---|
TimeSeries |
MultiBufferSized.createSequence(VoxelDataType dataType) |
Copyright © 2010–2023 Owen Feehan, ETH Zurich, University of Zurich, Hoffmann-La Roche. All rights reserved.