Uses of Class
org.anchoranalysis.experiment.JobExecutionException

Packages that use JobExecutionException

Package	Description
org.anchoranalysis.experiment.bean.task	Defines a task, which is a set of operations run on an input, that may or may not generate an output.
org.anchoranalysis.experiment.task.processor	Non-bean classes related to JobProcessor.
org.anchoranalysis.launcher.run.tasks	Loading and displaying pre-defined tasks.
org.anchoranalysis.plugin.annotation.bean.aggregate	Beans to combine two or more annotations.
org.anchoranalysis.plugin.annotation.bean.comparison	Task to compare a set of annotations to a segmentation or another set of annotations.
org.anchoranalysis.plugin.image.task.bean	A parent package for many different kinds of tasks.
org.anchoranalysis.plugin.image.task.bean.combine	Combining multiple images together into a single image.
org.anchoranalysis.plugin.image.task.bean.feature	Tasks pertaining to Features.
org.anchoranalysis.plugin.image.task.bean.format	Tasks for converting image-formats.
org.anchoranalysis.plugin.image.task.bean.grouped	Tasks that involved stacks (usually each channel from an image) that are somehow grouped-together.
org.anchoranalysis.plugin.image.task.bean.labeller	Associating labels with images.
org.anchoranalysis.plugin.image.task.bean.scale	Tasks to scale an image.
org.anchoranalysis.plugin.image.task.bean.segment	Tasks to segment an image.
org.anchoranalysis.plugin.image.task.bean.slice	Tasks that process on one or more slices from a z-stack.
org.anchoranalysis.plugin.image.task.slice	Non-bean classes pertaining to combining stacks into a single stack.
org.anchoranalysis.plugin.io.bean.task	Implementations of Task related to file-system I/O.
org.anchoranalysis.plugin.mpp.bean.convert	Converting from NamedChannelsInput to the input-type expected by a Task.
org.anchoranalysis.plugin.mpp.bean.define	Beans related to Define involving Mark or related classes.

Uses of JobExecutionException in org.anchoranalysis.experiment.bean.task

Methods in org.anchoranalysis.experiment.bean.task that throw JobExecutionException

Modifier and Type	Method	Description
abstract void	Task.doJobOnInput(InputBound<T,S> input)	Performs the task on a particular input.
boolean	Task.executeJob(ParametersUnbound<T,S> parametersUnbound)	Runs the task on one particular input (a job).

Uses of JobExecutionException in org.anchoranalysis.experiment.task.processor

Methods in org.anchoranalysis.experiment.task.processor that return types with arguments of type JobExecutionException

Modifier and Type	Method	Description
Optional<JobExecutionException>	CallableJob.call()

Uses of JobExecutionException in org.anchoranalysis.launcher.run.tasks

Methods in org.anchoranalysis.launcher.run.tasks that throw JobExecutionException

Modifier and Type	Method	Description
void	HelloWorld.doJobOnInput(InputBound<S,NoSharedState> input)

Uses of JobExecutionException in org.anchoranalysis.plugin.annotation.bean.aggregate

Methods in org.anchoranalysis.plugin.annotation.bean.aggregate that throw JobExecutionException

Modifier and Type	Method	Description
void	AggregateAnnotations.doJobOnInput(InputBound<AnnotationWithStrategy<S>,AggregateSharedState> input)

Uses of JobExecutionException in org.anchoranalysis.plugin.annotation.bean.comparison

Methods in org.anchoranalysis.plugin.annotation.bean.comparison that throw JobExecutionException

Modifier and Type	Method	Description
void	CompareAnnotations.doJobOnInput(InputBound<AnnotationComparisonInput<ProvidesStackInput>,ComparisonSharedState<T>> input)

Uses of JobExecutionException in org.anchoranalysis.plugin.image.task.bean

Methods in org.anchoranalysis.plugin.image.task.bean that throw JobExecutionException

Modifier and Type	Method	Description
protected abstract U	RasterTask.createSharedStateJob(InputOutputContext context)	Creates a shared-state for the duration of a particular input-job.
void	RasterTask.doJobOnInput(InputBound<NamedChannelsInput,S> input)
abstract void	RasterTask.doStack(InputBound<NamedChannelsInput,S> input, U sharedStateJob, int seriesIndex, int numberSeries, InputOutputContext context)	Processes one stack from a series.
abstract void	RasterTask.endSeries(S sharedStateTask, U sharedStateJob, InputOutputContext context)	Ends processing of a series.
abstract void	RasterTask.startSeries(S sharedStateTask, U sharedStateJob, InputOutputContext context)	Starts processing of a series.

Uses of JobExecutionException in org.anchoranalysis.plugin.image.task.bean.combine

Methods in org.anchoranalysis.plugin.image.task.bean.combine that throw JobExecutionException

Modifier and Type	Method	Description
void	Montage.doJobOnInput(InputBound<StackSequenceInput,MontageSharedState> input)

Uses of JobExecutionException in org.anchoranalysis.plugin.image.task.bean.feature

Methods in org.anchoranalysis.plugin.image.task.bean.feature that throw JobExecutionException

Modifier and Type	Method	Description
void	ExportFeatures.doJobOnInput(InputBound<T,FeatureExporter<S>> input)

Uses of JobExecutionException in org.anchoranalysis.plugin.image.task.bean.format

Methods in org.anchoranalysis.plugin.image.task.bean.format that throw JobExecutionException

Modifier and Type	Method	Description
protected OutputSequenceIndexed<Stack,String>	ConvertImageFormat.createSharedStateJob(InputOutputContext context)	Sets a new output-sequence for the series.
void	ConvertImageFormat.doStack(InputBound<NamedChannelsInput,NoSharedState> input, OutputSequenceIndexed<Stack,String> sharedStateJob, int seriesIndex, int numberSeries, InputOutputContext context)
void	ConvertImageFormat.endSeries(NoSharedState sharedStateTask, OutputSequenceIndexed<Stack,String> sharedStateJob, InputOutputContext context)
void	ConvertImageFormat.startSeries(NoSharedState sharedStateTask, OutputSequenceIndexed<Stack,String> sharedStateJob, InputOutputContext context)

Uses of JobExecutionException in org.anchoranalysis.plugin.image.task.bean.grouped

Methods in org.anchoranalysis.plugin.image.task.bean.grouped that throw JobExecutionException

Modifier and Type	Method	Description
void	GroupedStackBase.doJobOnInput(InputBound<ProvidesStackInput,GroupedSharedState<S,T>> input)

Uses of JobExecutionException in org.anchoranalysis.plugin.image.task.bean.labeller

Methods in org.anchoranalysis.plugin.image.task.bean.labeller that throw JobExecutionException

Modifier and Type	Method	Description
void	ImageAssignLabel.doJobOnInput(InputBound<ProvidesStackInput,SharedStateFilteredImageOutput<T>> input)

Uses of JobExecutionException in org.anchoranalysis.plugin.image.task.bean.scale

Methods in org.anchoranalysis.plugin.image.task.bean.scale that throw JobExecutionException

Modifier and Type	Method	Description
void	ScaleImage.doJobOnInput(InputBound<StackSequenceInput,S> input)

Uses of JobExecutionException in org.anchoranalysis.plugin.image.task.bean.segment

Methods in org.anchoranalysis.plugin.image.task.bean.segment that throw JobExecutionException

Modifier and Type	Method	Description
void	SegmentInstanceWithModel.doJobOnInput(InputBound<StackSequenceInput,SharedStateSegmentInstance<T>> input)

Uses of JobExecutionException in org.anchoranalysis.plugin.image.task.bean.slice

Methods in org.anchoranalysis.plugin.image.task.bean.slice that throw JobExecutionException

Modifier and Type	Method	Description
void	ExtractSlice.doJobOnInput(InputBound<NamedChannelsInput,SharedStateSelectedSlice> input)

Uses of JobExecutionException in org.anchoranalysis.plugin.image.task.slice

Methods in org.anchoranalysis.plugin.image.task.slice that throw JobExecutionException

Modifier and Type	Method	Description
void	MontageSharedState.copyStackInto(CheckedSupplier<RGBStack,InputReadFailedException> source, String identifier, Path path, Optional<String> label)	Copies a Stack into a BoundingBox in the combined image, resizing if necessary.

Uses of JobExecutionException in org.anchoranalysis.plugin.io.bean.task

Methods in org.anchoranalysis.plugin.io.bean.task that throw JobExecutionException

Modifier and Type	Method	Description
void	CombineCSV.doJobOnInput(InputBound<FileInput,CSVWriter> parameters)
void	CopyFiles.doJobOnInput(InputBound<FileWithDirectoryInput,RecordingCounter<T>> input)
void	SummarizeBase.doJobOnInput(InputBound<T,Summarizer<S>> input)

Uses of JobExecutionException in org.anchoranalysis.plugin.mpp.bean.convert

Methods in org.anchoranalysis.plugin.mpp.bean.convert that throw JobExecutionException

Modifier and Type	Method	Description
void	ConvertNamedChannels.doJobOnInput(InputBound<T,SharedStateRememberConverted<U,S>> inputBound)

Uses of JobExecutionException in org.anchoranalysis.plugin.mpp.bean.define

Methods in org.anchoranalysis.plugin.mpp.bean.define that throw JobExecutionException

Modifier and Type	Method	Description
void	Develop.doJobOnInput(InputBound<MultiInput,NoSharedState> input)