Uses of Class
org.anchoranalysis.image.bean.nonbean.init.ImageInitialization

Packages that use ImageInitialization

Package	Description
org.anchoranalysis.image.bean.segment.binary	Base classes to perform binary-segmentation.
org.anchoranalysis.image.feature.calculator	Implementations of FeatureCalculatorMulti related to images, especially to create tables of feature-calculations.
org.anchoranalysis.image.feature.calculator.merged	A particular implementation of FeatureCalculatorMulti for feature-calculations based upon pairs of image-objects.
org.anchoranalysis.image.io	Reading and writing of image-related data objects to and from the filesystem.
org.anchoranalysis.mpp.init	Parameters used to initialize certain types of beans.
org.anchoranalysis.plugin.image.bean.channel.provider	Implementations of ChannelProvider that are generic base-classes or otherwise abstract or general.
org.anchoranalysis.plugin.image.bean.dimensions.provider	Implementations of DimensionsProvider.
org.anchoranalysis.plugin.image.bean.histogram.provider	Implementations of HistogramProvider.
org.anchoranalysis.plugin.image.bean.mask.provider.convert	Implementations of MaskProvider that convert providers of other types to ObjectMasks.
org.anchoranalysis.plugin.image.bean.object.provider	Implementations of ObjectCollectionProvider.
org.anchoranalysis.plugin.image.bean.stack.provider	Implementations of StackProvider.
org.anchoranalysis.plugin.image.feature.bean.shared.object	Beans involving SharedObjects and ObjectCollection.
org.anchoranalysis.plugin.image.task.feature	Non-bean classes pertaining to Features as used in tasks.
org.anchoranalysis.plugin.image.task.stack	Non-bean classes pertaining to stacks and channels as used in tasks.
org.anchoranalysis.plugin.mpp.bean.define	Beans related to Define involving Mark or related classes.

Uses of ImageInitialization in org.anchoranalysis.image.bean.segment.binary

Methods in org.anchoranalysis.image.bean.segment.binary with parameters of type ImageInitialization

Modifier and Type	Method	Description
void	BinarySegmentationReference.onInitialization(ImageInitialization initialization)

Uses of ImageInitialization in org.anchoranalysis.image.feature.calculator

Methods in org.anchoranalysis.image.feature.calculator with parameters of type ImageInitialization

Modifier and Type	Method	Description
void	FeatureTableCalculator.start(ImageInitialization initialization, Optional<EnergyStack> energyStack, Logger logger)	Initializes a feature store that has the same structure as that previously created by createFeatures() from the same object.
void	SingleTableCalculator.start(ImageInitialization initialization, Optional<EnergyStack> energyStack, Logger logger)

Uses of ImageInitialization in org.anchoranalysis.image.feature.calculator.merged

Methods in org.anchoranalysis.image.feature.calculator.merged with parameters of type ImageInitialization

Modifier and Type	Method	Description
FeatureCalculatorMulti<FeatureInputStack>	MergedPairsFeatures.createCalculator(CreateCalculatorHelper calculatorCreator, ImageInitialization initialization, BoundReplaceStrategy<FeatureInputStack,? extends ReplaceStrategy<FeatureInputStack>> cachingStrategy)	Creates a feature calculator for stack features.
FeatureCalculatorMulti<FeatureInputPairObjects>	MergedPairsFeatures.createPair(CreateCalculatorHelper calculatorCreator, ImageInitialization initialization, CacheTransferSourceCollection cacheTransferSource)	Creates a feature calculator for pair object features.
FeatureCalculatorMulti<FeatureInputSingleObject>	MergedPairsFeatures.createSingle(CreateCalculatorHelper calculatorCreator, ImageInitialization initialization, BoundReplaceStrategy<FeatureInputSingleObject,CacheAndReuseStrategy<FeatureInputSingleObject>> cachingStrategy)	Creates a feature calculator for single object features.
void	PairsTableCalculator.start(ImageInitialization initializtion, Optional<EnergyStack> energyStack, Logger logger)

Uses of ImageInitialization in org.anchoranalysis.image.io

Methods in org.anchoranalysis.image.io that return ImageInitialization

Modifier and Type	Method	Description
static ImageInitialization	ImageInitializationFactory.create(InputOutputContext context)	Create from an InputOutputContext - without any suggested size.
static ImageInitialization	ImageInitializationFactory.create(InputOutputContext context, Optional<ImageSizeSuggestion> suggestedSize)	Create from an InputOutputContext - with a suggested size.

Uses of ImageInitialization in org.anchoranalysis.mpp.init

Methods in org.anchoranalysis.mpp.init that return ImageInitialization

Modifier and Type	Method	Description
ImageInitialization	PointsInitialization.getImage()	The image initialization associated with this points initialization.
ImageInitialization	MarksInitialization.image()	The image initialization associated with this marks initialization.

Methods in org.anchoranalysis.mpp.init with parameters of type ImageInitialization

Modifier and Type	Method	Description
static PointsInitialization	PointsInitialization.create(ImageInitialization image, SharedObjects so)	Creates a new PointsInitialization instance.

Constructors in org.anchoranalysis.mpp.init with parameters of type ImageInitialization

Modifier	Constructor	Description
	MarksInitialization(ImageInitialization image)	Constructs a MarksInitialization with the given ImageInitialization.

Uses of ImageInitialization in org.anchoranalysis.plugin.image.bean.channel.provider

Methods in org.anchoranalysis.plugin.image.bean.channel.provider with parameters of type ImageInitialization

Modifier and Type	Method	Description
void	FromInput.onInitialization(ImageInitialization initialization)

Uses of ImageInitialization in org.anchoranalysis.plugin.image.bean.dimensions.provider

Methods in org.anchoranalysis.plugin.image.bean.dimensions.provider with parameters of type ImageInitialization

Modifier and Type	Method	Description
void	FromChannel.onInitialization(ImageInitialization initialization)

Uses of ImageInitialization in org.anchoranalysis.plugin.image.bean.histogram.provider

Methods in org.anchoranalysis.plugin.image.bean.histogram.provider with parameters of type ImageInitialization

Modifier and Type	Method	Description
void	Reference.onInitialization(ImageInitialization initialization)

Uses of ImageInitialization in org.anchoranalysis.plugin.image.bean.mask.provider.convert

Methods in org.anchoranalysis.plugin.image.bean.mask.provider.convert with parameters of type ImageInitialization

Modifier and Type	Method	Description
void	FromStackChannel.onInitialization(ImageInitialization initialization)

Uses of ImageInitialization in org.anchoranalysis.plugin.image.bean.object.provider

Methods in org.anchoranalysis.plugin.image.bean.object.provider with parameters of type ImageInitialization

Modifier and Type	Method	Description
void	ReferenceOrElse.onInitialization(ImageInitialization initialization)

Uses of ImageInitialization in org.anchoranalysis.plugin.image.bean.stack.provider

Methods in org.anchoranalysis.plugin.image.bean.stack.provider with parameters of type ImageInitialization

Modifier and Type	Method	Description
void	FromInput.onInitialization(ImageInitialization initialization)

Uses of ImageInitialization in org.anchoranalysis.plugin.image.feature.bean.shared.object

Methods in org.anchoranalysis.plugin.image.feature.bean.shared.object with parameters of type ImageInitialization

Modifier and Type	Method	Description
protected abstract void	FeatureSingleObjectFromShared.beforeCalcWithInitialization(ImageInitialization initialization)	Performs initialization before calculation with image-specific initialization.
protected void	MaskAsSingleObject.beforeCalcWithInitialization(ImageInitialization initialization)
protected void	ObjectAggregationBase.beforeCalcWithInitialization(ImageInitialization initialization)

Uses of ImageInitialization in org.anchoranalysis.plugin.image.task.feature

Methods in org.anchoranalysis.plugin.image.task.feature that return ImageInitialization

Modifier and Type	Method	Description
ImageInitialization	InitializationWithEnergyStack.getImage()	The image initialization.

Constructors in org.anchoranalysis.plugin.image.task.feature with parameters of type ImageInitialization

Modifier	Constructor	Description
	InitializationWithEnergyStack(ImageInitialization image, EnergyStack energyStack)	Creates a new InitializationWithEnergyStack instance.

Uses of ImageInitialization in org.anchoranalysis.plugin.image.task.stack

Methods in org.anchoranalysis.plugin.image.task.stack that return ImageInitialization

Modifier and Type	Method	Description
static ImageInitialization	InitializationFactory.createWithoutStacks(InitializationContext context)	Creates an ImageInitialization without adding any stacks.
static ImageInitialization	InitializationFactory.createWithStacks(ProvidesStackInput input, InitializationContext context)	Creates an ImageInitialization with stacks added from the input.

Uses of ImageInitialization in org.anchoranalysis.plugin.mpp.bean.define

Methods in org.anchoranalysis.plugin.mpp.bean.define that return ImageInitialization

Modifier and Type	Method	Description
protected ImageInitialization	DefineOutputter.createInitialization(InitializationContext context, Optional<SharedObjects> sharedObjects, Optional<Dictionary> dictionary)	Creates an ImageInitialization from the given context, shared objects, and dictionary.
protected ImageInitialization	DefineOutputter.createInitialization(InitializationContext context, ExportSharedObjects input)	Creates an ImageInitialization from the given context and input.

Method parameters in org.anchoranalysis.plugin.mpp.bean.define with type arguments of type ImageInitialization

Modifier and Type	Method	Description
<S> void	DefineOutputter.process(InputBound<MultiInput,S> input, DefineOutputter.Processor<ImageInitialization> operation)	Processes the input using the provided operation.
<S> S	DefineOutputterWithEnergy.processInput(InitializationContext context, SharedObjects sharedObjects, Optional<Dictionary> dictionary, DefineOutputterWithEnergy.ProcessWithEnergyStack<ImageInitialization,S> operation)	Processes the input with an energy stack and shared objects.
<S> void	DefineOutputterWithEnergy.processInput(ExportSharedObjects input, InitializationContext context, DefineOutputterWithEnergy.ProcessWithEnergyStack<ImageInitialization,S> operation)	Processes the input with an energy stack.