Uses of Class
org.anchoranalysis.image.feature.input.FeatureInputStack

Packages that use FeatureInputStack

Package	Description
org.anchoranalysis.image.feature.calculator.merged	A particular implementation of FeatureCalculatorMulti for feature-calculations based upon pairs of image-objects.
org.anchoranalysis.mpp.feature.bean.energy.scheme	Creating EnergySchemes.
org.anchoranalysis.mpp.feature.energy.scheme	Factorized form of storing the energy during an energy-minimization optimization scheme.
org.anchoranalysis.plugin.image.feature.bean.list	Implementations of FeatureListProvider.
org.anchoranalysis.plugin.image.feature.bean.object.combine	Features from combinations of ObjectMasks.
org.anchoranalysis.plugin.image.feature.bean.stack.intensity	Implementations of FeatureStack or other features that involve processing a Stack.
org.anchoranalysis.plugin.image.feature.bean.stack.object	Implementations of FeatureStack that process an ObjectCollection.
org.anchoranalysis.plugin.image.feature.stack.calculation	Implementations of CalculationPart that process Stacks as used by features elsewhere in this package.
org.anchoranalysis.plugin.image.task.bean.feature.source	Source of rows in feature-tables with FeatureSource and derived classes.
org.anchoranalysis.plugin.image.task.bean.labeller	Associating labels with images.
org.anchoranalysis.plugin.image.task.bean.slice	Tasks that process on one or more slices from a z-stack.
org.anchoranalysis.plugin.opencv.bean.feature	Extracting features using OpenCV.

Uses of FeatureInputStack in org.anchoranalysis.image.feature.calculator.merged

Methods in org.anchoranalysis.image.feature.calculator.merged that return types with arguments of type FeatureInputStack

Modifier and Type	Method	Description
FeatureCalculatorMulti<FeatureInputStack>	MergedPairsFeatures.createCalculator(CreateCalculatorHelper calculatorCreator, ImageInitialization initialization, BoundReplaceStrategy<FeatureInputStack,? extends ReplaceStrategy<FeatureInputStack>> cachingStrategy)	Creates a feature calculator for stack features.
FeatureList<FeatureInputStack>	MergedPairsFeatures.getImage()

Method parameters in org.anchoranalysis.image.feature.calculator.merged with type arguments of type FeatureInputStack

Modifier and Type	Method	Description
FeatureCalculatorMulti<FeatureInputStack>	MergedPairsFeatures.createCalculator(CreateCalculatorHelper calculatorCreator, ImageInitialization initialization, BoundReplaceStrategy<FeatureInputStack,? extends ReplaceStrategy<FeatureInputStack>> cachingStrategy)	Creates a feature calculator for stack features.
FeatureCalculatorMulti<FeatureInputStack>	MergedPairsFeatures.createCalculator(CreateCalculatorHelper calculatorCreator, ImageInitialization initialization, BoundReplaceStrategy<FeatureInputStack,? extends ReplaceStrategy<FeatureInputStack>> cachingStrategy)	Creates a feature calculator for stack features.

Constructor parameters in org.anchoranalysis.image.feature.calculator.merged with type arguments of type FeatureInputStack

Modifier	Constructor	Description
	MergedPairsFeatures(FeatureList<FeatureInputStack> image, FeatureList<FeatureInputSingleObject> single, FeatureList<FeatureInputPairObjects> pair)	Creates with features for single, pair and image as a whole.

Uses of FeatureInputStack in org.anchoranalysis.mpp.feature.bean.energy.scheme

Methods in org.anchoranalysis.mpp.feature.bean.energy.scheme that return types with arguments of type FeatureInputStack

Modifier and Type	Method	Description
List<NamedBean<FeatureListProvider<FeatureInputStack>>>	EnergySchemeCreatorByElement.getListImageFeatures()	List of named feature providers for image-based features.

Method parameters in org.anchoranalysis.mpp.feature.bean.energy.scheme with type arguments of type FeatureInputStack

Modifier and Type	Method	Description
void	EnergySchemeCreatorByElement.setListImageFeatures(List<NamedBean<FeatureListProvider<FeatureInputStack>>> listImageFeatures)	List of named feature providers for image-based features.

Uses of FeatureInputStack in org.anchoranalysis.mpp.feature.energy.scheme

Methods in org.anchoranalysis.mpp.feature.energy.scheme that return types with arguments of type FeatureInputStack

Modifier and Type	Method	Description
List<NamedBean<Feature<FeatureInputStack>>>	EnergyScheme.getListImageFeatures()	A list of features of the image that are calculated first, and exposed to the other features as parameters.

Constructor parameters in org.anchoranalysis.mpp.feature.energy.scheme with type arguments of type FeatureInputStack

Modifier	Constructor	Description
	EnergyScheme(FeatureList<FeatureInputSingleMemo> individual, FeatureList<FeatureInputPairMemo> pair, FeatureList<FeatureInputAllMemo> all, RegionMap regionMap, AddCriteriaPair pairAddCriteria, Optional<DictionaryProvider> dictionary, List<NamedBean<Feature<FeatureInputStack>>> listImageFeatures)	Creates an energy scheme with the specified features, region map, and additional options.

Uses of FeatureInputStack in org.anchoranalysis.plugin.image.feature.bean.list

Methods in org.anchoranalysis.plugin.image.feature.bean.list that return types with arguments of type FeatureInputStack

Modifier and Type	Method	Description
FeatureList<FeatureInputStack>	IntensityMoments.get()

Uses of FeatureInputStack in org.anchoranalysis.plugin.image.feature.bean.object.combine

Methods in org.anchoranalysis.plugin.image.feature.bean.object.combine that return types with arguments of type FeatureInputStack

Modifier and Type	Method	Description
List<NamedBean<FeatureListProvider<FeatureInputStack>>>	PairNeighbors.getFeaturesImage()	Additional features that only depend on the image, so do not need to be replicated for every object.

Method parameters in org.anchoranalysis.plugin.image.feature.bean.object.combine with type arguments of type FeatureInputStack

Modifier and Type	Method	Description
void	PairNeighbors.setFeaturesImage(List<NamedBean<FeatureListProvider<FeatureInputStack>>> featuresImage)	Additional features that only depend on the image, so do not need to be replicated for every object.

Uses of FeatureInputStack in org.anchoranalysis.plugin.image.feature.bean.stack.intensity

Method parameters in org.anchoranalysis.plugin.image.feature.bean.stack.intensity with type arguments of type FeatureInputStack

Modifier and Type	Method	Description
protected double	Intensity.calculate(FeatureCalculationInput<FeatureInputStack> input)
protected double	NumberChannels.calculate(FeatureCalculationInput<FeatureInputStack> input)

Uses of FeatureInputStack in org.anchoranalysis.plugin.image.feature.bean.stack.object

Methods in org.anchoranalysis.plugin.image.feature.bean.stack.object with parameters of type FeatureInputStack

Modifier and Type	Method	Description
protected FeatureInputSingleObject	CalculateDeriveObjectInput.execute(FeatureInputStack input)

Method parameters in org.anchoranalysis.plugin.image.feature.bean.stack.object with type arguments of type FeatureInputStack

Modifier and Type	Method	Description
double	AsObjectMask.calculate(FeatureCalculationInput<FeatureInputStack> input)
double	QuantileAcrossConnectedComponents.calculate(FeatureCalculationInput<FeatureInputStack> input)

Uses of FeatureInputStack in org.anchoranalysis.plugin.image.feature.stack.calculation

Methods in org.anchoranalysis.plugin.image.feature.stack.calculation with parameters of type FeatureInputStack

Modifier and Type	Method	Description
protected Histogram	CalculateHistogram.execute(FeatureInputStack input)
protected Histogram	CalculateHistogramMasked.execute(FeatureInputStack input)

Uses of FeatureInputStack in org.anchoranalysis.plugin.image.task.bean.feature.source

Method parameters in org.anchoranalysis.plugin.image.task.bean.feature.source with type arguments of type FeatureInputStack

Modifier and Type	Method	Description
protected ResultsVectorWithThumbnail	FromImage.calculateResultsForInput(ProvidesStackInput input, FeatureCalculationContext<FeatureList<FeatureInputStack>> context)

Uses of FeatureInputStack in org.anchoranalysis.plugin.image.task.bean.labeller

Methods in org.anchoranalysis.plugin.image.task.bean.labeller that return types with arguments of type FeatureInputStack

Modifier and Type	Method	Description
FeatureListProvider<FeatureInputStack>	BinaryClassifierImageLabeller.getClassifierProvider()	Provider for the classifier feature list.
List<NamedBean<FeatureListProvider<FeatureInputStack>>>	BinaryClassifierImageLabeller.getListFeatures()	List of named feature list providers for additional features.

Method parameters in org.anchoranalysis.plugin.image.task.bean.labeller with type arguments of type FeatureInputStack

Modifier and Type	Method	Description
void	BinaryClassifierImageLabeller.setClassifierProvider(FeatureListProvider<FeatureInputStack> classifierProvider)	Provider for the classifier feature list.
void	BinaryClassifierImageLabeller.setListFeatures(List<NamedBean<FeatureListProvider<FeatureInputStack>>> listFeatures)	List of named feature list providers for additional features.

Uses of FeatureInputStack in org.anchoranalysis.plugin.image.task.bean.slice

Methods in org.anchoranalysis.plugin.image.task.bean.slice that return types with arguments of type FeatureInputStack

Modifier and Type	Method	Description
FeatureListProvider<FeatureInputStack>	ExtractSlice.getScoreProvider()

Method parameters in org.anchoranalysis.plugin.image.task.bean.slice with type arguments of type FeatureInputStack

Modifier and Type	Method	Description
void	ExtractSlice.setScoreProvider(FeatureListProvider<FeatureInputStack> scoreProvider)

Uses of FeatureInputStack in org.anchoranalysis.plugin.opencv.bean.feature

Methods in org.anchoranalysis.plugin.opencv.bean.feature that return types with arguments of type FeatureInputStack

Modifier and Type	Method	Description
FeatureList<FeatureInputStack>	HOGDescriptor.get()

Method parameters in org.anchoranalysis.plugin.opencv.bean.feature with type arguments of type FeatureInputStack

Modifier and Type	Method	Description
protected double	HOGFeature.calculate(FeatureCalculationInput<FeatureInputStack> input)