Uses of Package
org.anchoranalysis.image.voxel

Packages that use org.anchoranalysis.image.voxel

Package	Description
org.anchoranalysis.image.bean.segment.binary	Base classes to perform binary-segmentation.
org.anchoranalysis.image.bean.threshold	Base classes for thresholding and calculating levels for thresholding.
org.anchoranalysis.image.core.bufferedimage	Conversions and operations involving Java AWT's BufferedImage.
org.anchoranalysis.image.core.channel	The Channel core data-class and related operations and converters.
org.anchoranalysis.image.core.channel.factory	Factory classes for creating Channel for various voxel data-types.
org.anchoranalysis.image.core.mask	An image with only two permissible states.
org.anchoranalysis.image.core.mask.combine	Binary operations involving voxelwise combination of Mask.
org.anchoranalysis.image.core.object	The key data entity org.anchoranalysis.image.voxel.object and related-classes and operations.
org.anchoranalysis.image.core.object.label	Labelling elements (object-masks or similar) with unique successive integers in a channel.
org.anchoranalysis.image.core.stack	Defines the key data object, Stack, and related classes.
org.anchoranalysis.image.inference.segment	Non-beans pertaining to segmentation of images via model inference.
org.anchoranalysis.image.voxel	Data-structures to store and manipulate image raster-data or voxels.
org.anchoranalysis.image.voxel.assigner	Assigns values to some or all voxels.
org.anchoranalysis.image.voxel.binary	The BinaryVoxels class and related operations.
org.anchoranalysis.image.voxel.buffer	A buffer of voxel-values, usually corresponding to a single z-slice in Voxels.
org.anchoranalysis.image.voxel.convert	Converting Voxels to different data-types.
org.anchoranalysis.image.voxel.convert.bufferedimage	Converts anchor data-structures to the BufferedImage used by Java's AWT.
org.anchoranalysis.image.voxel.convert.imglib2	Converts anchor data-structures to those used by ImgLib2.
org.anchoranalysis.image.voxel.extracter	Methods to read/copy/duplicate portions of voxels.
org.anchoranalysis.image.voxel.extracter.predicate	Methods to find or count voxels that satisfy a predicate.
org.anchoranalysis.image.voxel.factory	Creates new instances of Voxels and VoxelsUntyped with specific data-types.
org.anchoranalysis.image.voxel.iterator	Utilities to iterate over voxel-locations in images and sub-regions of images.
org.anchoranalysis.image.voxel.iterator.intersecting	Like org.anchoranalysis.image.voxel.iterator but refers to iterators that operation over the intersecting regions of two entities.
org.anchoranalysis.image.voxel.kernel	Applying a kernel via convolution to voxels.
org.anchoranalysis.image.voxel.object	The fundamental data class that is an ObjectMask and related structures.
org.anchoranalysis.image.voxel.projection	Classes for calculating differnet kind of projections of voxel values across multiple buffers.
org.anchoranalysis.image.voxel.resizer	Different interpolator methods to use when scaling voxels.
org.anchoranalysis.image.voxel.statistics	Statistics about aggregated voxel intensities.
org.anchoranalysis.image.voxel.thresholder	Thresholding operations on voxels.
org.anchoranalysis.io.bioformats.copyconvert	Converts the byte stream opened by Bioformats into channels of particular data-type.
org.anchoranalysis.io.imagej.convert	Converts to and from ImageJ data-structures for images.
org.anchoranalysis.mpp.mark.voxelized	A mark after a voxel-representation has been inferred.
org.anchoranalysis.mpp.overlap	Calculating overlaps between two Marks.
org.anchoranalysis.plugin.fiji.bean.channel.grayscalereconstruction	Morphological grayscale-reconstruction algorithm.
org.anchoranalysis.plugin.fiji.bean.channel.provider.distance	Euclidean Distance Transform implementations via FIJI.
org.anchoranalysis.plugin.fiji.bean.threshold	Implementations of Thresholder that use FIJI.
org.anchoranalysis.plugin.image.bean.blur	Filters that perform blurring.
org.anchoranalysis.plugin.image.bean.object.segment.channel.watershed.minima.grayscalereconstruction	Grayscale reconstruction to support the Watershed transformation.
org.anchoranalysis.plugin.image.bean.segment.binary	Implementations of BinarySegmentation.
org.anchoranalysis.plugin.image.segment.thresholder.slice	Non-beans pertaining to segmenting a z-stack slice-by-slice.
org.anchoranalysis.plugin.image.segment.watershed.encoding	Encoding voxels in a watershed-transformation implementation.
org.anchoranalysis.plugin.imagej.bean.threshold	Implementations of Thresholder that call ImageJ.
org.anchoranalysis.plugin.opencv.convert	Conversion to/from OpenCV data-structures.
org.anchoranalysis.test.image	Testing utilities and fixtures with no greater downstream dependency than anchor-image-io or anchor-io-bioformats or anchor-imagej.

Classes in org.anchoranalysis.image.voxel used by org.anchoranalysis.image.bean.segment.binary

Class	Description
VoxelsUntyped	Stores memory buffers representing image voxels, without explicit typing of buffers.

Classes in org.anchoranalysis.image.voxel used by org.anchoranalysis.image.bean.threshold

Class	Description
VoxelsUntyped	Stores memory buffers representing image voxels, without explicit typing of buffers.

Classes in org.anchoranalysis.image.voxel used by org.anchoranalysis.image.core.bufferedimage

Class	Description
Voxels	A box (3-dimensions) with voxel-data.

Classes in org.anchoranalysis.image.voxel used by org.anchoranalysis.image.core.channel

Class	Description
Voxels	A box (3-dimensions) with voxel-data.
VoxelsUntyped	Stores memory buffers representing image voxels, without explicit typing of buffers.

Classes in org.anchoranalysis.image.voxel used by org.anchoranalysis.image.core.channel.factory

Class	Description
Voxels	A box (3-dimensions) with voxel-data.

Classes in org.anchoranalysis.image.voxel used by org.anchoranalysis.image.core.mask

Class	Description
Voxels	A box (3-dimensions) with voxel-data.

Classes in org.anchoranalysis.image.voxel used by org.anchoranalysis.image.core.mask.combine

Class	Description
Voxels	A box (3-dimensions) with voxel-data.

Classes in org.anchoranalysis.image.voxel used by org.anchoranalysis.image.core.object

Class	Description
VoxelsUntyped	Stores memory buffers representing image voxels, without explicit typing of buffers.

Classes in org.anchoranalysis.image.voxel used by org.anchoranalysis.image.core.object.label

Class	Description
Voxels	A box (3-dimensions) with voxel-data.

Classes in org.anchoranalysis.image.voxel used by org.anchoranalysis.image.core.stack

Class	Description
Voxels	A box (3-dimensions) with voxel-data.

Classes in org.anchoranalysis.image.voxel used by org.anchoranalysis.image.inference.segment

Class	Description
Voxels	A box (3-dimensions) with voxel-data.

Classes in org.anchoranalysis.image.voxel used by org.anchoranalysis.image.voxel

Class	Description
BoundedVoxels	Voxels that exist within a particular bounding-box in an image.
Voxels	A box (3-dimensions) with voxel-data.
VoxelsUntyped	Stores memory buffers representing image voxels, without explicit typing of buffers.

Classes in org.anchoranalysis.image.voxel used by org.anchoranalysis.image.voxel.assigner

Class	Description
Voxels	A box (3-dimensions) with voxel-data.

Classes in org.anchoranalysis.image.voxel used by org.anchoranalysis.image.voxel.binary

Class	Description
Voxels	A box (3-dimensions) with voxel-data.

Classes in org.anchoranalysis.image.voxel used by org.anchoranalysis.image.voxel.buffer

Class	Description
Voxels	A box (3-dimensions) with voxel-data.

Classes in org.anchoranalysis.image.voxel used by org.anchoranalysis.image.voxel.convert

Class	Description
Voxels	A box (3-dimensions) with voxel-data.
VoxelsUntyped	Stores memory buffers representing image voxels, without explicit typing of buffers.

Classes in org.anchoranalysis.image.voxel used by org.anchoranalysis.image.voxel.convert.bufferedimage

Class	Description
Voxels	A box (3-dimensions) with voxel-data.

Classes in org.anchoranalysis.image.voxel used by org.anchoranalysis.image.voxel.convert.imglib2

Class	Description
Voxels	A box (3-dimensions) with voxel-data.
VoxelsUntyped	Stores memory buffers representing image voxels, without explicit typing of buffers.

Classes in org.anchoranalysis.image.voxel used by org.anchoranalysis.image.voxel.extracter

Class	Description
Voxels	A box (3-dimensions) with voxel-data.

Classes in org.anchoranalysis.image.voxel used by org.anchoranalysis.image.voxel.extracter.predicate

Class	Description
Voxels	A box (3-dimensions) with voxel-data.

Classes in org.anchoranalysis.image.voxel used by org.anchoranalysis.image.voxel.factory

Class	Description
BoundedVoxels	Voxels that exist within a particular bounding-box in an image.
Voxels	A box (3-dimensions) with voxel-data.
VoxelsUntyped	Stores memory buffers representing image voxels, without explicit typing of buffers.

Classes in org.anchoranalysis.image.voxel used by org.anchoranalysis.image.voxel.iterator

Class	Description
BoundedVoxels	Voxels that exist within a particular bounding-box in an image.
Voxels	A box (3-dimensions) with voxel-data.

Classes in org.anchoranalysis.image.voxel used by org.anchoranalysis.image.voxel.iterator.intersecting

Class	Description
BoundedVoxels	Voxels that exist within a particular bounding-box in an image.
Voxels	A box (3-dimensions) with voxel-data.

Classes in org.anchoranalysis.image.voxel used by org.anchoranalysis.image.voxel.kernel

Class	Description
Voxels	A box (3-dimensions) with voxel-data.

Classes in org.anchoranalysis.image.voxel used by org.anchoranalysis.image.voxel.object

Class	Description
BoundedVoxels	Voxels that exist within a particular bounding-box in an image.
Voxels	A box (3-dimensions) with voxel-data.

Classes in org.anchoranalysis.image.voxel used by org.anchoranalysis.image.voxel.projection

Class	Description
Voxels	A box (3-dimensions) with voxel-data.

Classes in org.anchoranalysis.image.voxel used by org.anchoranalysis.image.voxel.resizer

Class	Description
VoxelsUntyped	Stores memory buffers representing image voxels, without explicit typing of buffers.

Classes in org.anchoranalysis.image.voxel used by org.anchoranalysis.image.voxel.statistics

Class	Description
VoxelsUntyped	Stores memory buffers representing image voxels, without explicit typing of buffers.

Classes in org.anchoranalysis.image.voxel used by org.anchoranalysis.image.voxel.thresholder

Class	Description
Voxels	A box (3-dimensions) with voxel-data.
VoxelsUntyped	Stores memory buffers representing image voxels, without explicit typing of buffers.

Classes in org.anchoranalysis.image.voxel used by org.anchoranalysis.io.bioformats.copyconvert

Class	Description
Voxels	A box (3-dimensions) with voxel-data.
VoxelsUntyped	Stores memory buffers representing image voxels, without explicit typing of buffers.

Classes in org.anchoranalysis.image.voxel used by org.anchoranalysis.io.imagej.convert

Class	Description
Voxels	A box (3-dimensions) with voxel-data.
VoxelsUntyped	Stores memory buffers representing image voxels, without explicit typing of buffers.

Classes in org.anchoranalysis.image.voxel used by org.anchoranalysis.mpp.mark.voxelized

Class	Description
BoundedVoxels	Voxels that exist within a particular bounding-box in an image.

Classes in org.anchoranalysis.image.voxel used by org.anchoranalysis.mpp.overlap

Class	Description
BoundedVoxels	Voxels that exist within a particular bounding-box in an image.
Voxels	A box (3-dimensions) with voxel-data.

Classes in org.anchoranalysis.image.voxel used by org.anchoranalysis.plugin.fiji.bean.channel.grayscalereconstruction

Class	Description
VoxelsUntyped	Stores memory buffers representing image voxels, without explicit typing of buffers.

Classes in org.anchoranalysis.image.voxel used by org.anchoranalysis.plugin.fiji.bean.channel.provider.distance

Class	Description
Voxels	A box (3-dimensions) with voxel-data.

Classes in org.anchoranalysis.image.voxel used by org.anchoranalysis.plugin.fiji.bean.threshold

Class	Description
VoxelsUntyped	Stores memory buffers representing image voxels, without explicit typing of buffers.

Classes in org.anchoranalysis.image.voxel used by org.anchoranalysis.plugin.image.bean.blur

Class	Description
VoxelsUntyped	Stores memory buffers representing image voxels, without explicit typing of buffers.

Classes in org.anchoranalysis.image.voxel used by org.anchoranalysis.plugin.image.bean.object.segment.channel.watershed.minima.grayscalereconstruction

Class	Description
VoxelsUntyped	Stores memory buffers representing image voxels, without explicit typing of buffers.

Classes in org.anchoranalysis.image.voxel used by org.anchoranalysis.plugin.image.bean.segment.binary

Class	Description
VoxelsUntyped	Stores memory buffers representing image voxels, without explicit typing of buffers.

Classes in org.anchoranalysis.image.voxel used by org.anchoranalysis.plugin.image.segment.thresholder.slice

Class	Description
Voxels	A box (3-dimensions) with voxel-data.

Classes in org.anchoranalysis.image.voxel used by org.anchoranalysis.plugin.image.segment.watershed.encoding

Class	Description
Voxels	A box (3-dimensions) with voxel-data.

Classes in org.anchoranalysis.image.voxel used by org.anchoranalysis.plugin.imagej.bean.threshold

Class	Description
VoxelsUntyped	Stores memory buffers representing image voxels, without explicit typing of buffers.

Classes in org.anchoranalysis.image.voxel used by org.anchoranalysis.plugin.opencv.convert

Class	Description
Voxels	A box (3-dimensions) with voxel-data.

Classes in org.anchoranalysis.image.voxel used by org.anchoranalysis.test.image

Class	Description
Voxels	A box (3-dimensions) with voxel-data.