Package | Description |
---|---|
org.anchoranalysis.io.bioformats.copyconvert |
Converts the byte stream opened by Bioformats into channels of particular data-type.
|
org.anchoranalysis.io.bioformats.copyconvert.tobyte |
Converts the byte stream opened by Bioformats into channels of
ByteBuffer . |
org.anchoranalysis.io.bioformats.copyconvert.tofloat |
Converts the byte stream opened by Bioformats into channels of
FloatBuffer . |
org.anchoranalysis.io.bioformats.copyconvert.toint |
Converts the byte stream opened by Bioformats into channels of
IntBuffer . |
org.anchoranalysis.io.bioformats.copyconvert.toshort |
Converts the byte stream opened by Bioformats into channels of
ShortBuffer . |
Modifier and Type | Method and Description |
---|---|
static ConvertTo<?> |
ConvertToFactory.create(loci.formats.IFormatReader reader,
VoxelDataType targetDataType,
int effectiveBitsPerPixel) |
Modifier and Type | Method and Description |
---|---|
static void |
CopyConvert.copyAllFrames(loci.formats.IFormatReader reader,
List<Channel> destination,
ImageFileShape targetShape,
ConvertTo<?> convertTo,
ReadOptions readOptions,
OrientationChange orientationCorrection)
Copies all frames, channels, z-slices (in a byte-array) into a destination set of
Channel s converting them if necessary along the way. |
Modifier and Type | Class and Description |
---|---|
class |
ToUnsignedByte
Base class for implementations of
ConvertTo that convert to unsigned byte buffers. |
class |
ToUnsignedByteWithScaling
Like
ToUnsignedByte but applies scaling, if necessary, to map the original value to
8-bits. |
class |
UnsignedByteFromFloat
Converts a
ByteBuffer encoding a float type to unsigned byte type, as
expected in an Anchor VoxelBuffer . |
class |
UnsignedByteFromUnsignedByte
Like
ToUnsignedByte and provides common functionality when converting to an unsigned
byte. |
class |
UnsignedByteFromUnsignedByteInterleaving
Converts a
ByteBuffer encoding unsigned bytes (with interleaving) to
unsigned byte type, as expected in an Anchor VoxelBuffer . |
class |
UnsignedByteFromUnsignedByteNoInterleaving
Converts a
ByteBuffer encoding unsigned bytes (no interleaving) to
unsigned byte type, as expected in an Anchor VoxelBuffer . |
class |
UnsignedByteFromUnsignedByteNoInterleavingScale
Converts data of type unsigned byte to unsigned byte.
|
class |
UnsignedByteFromUnsignedInt
Converts data of type unsigned int to unsigned byte.
|
class |
UnsignedByteFromUnsignedShort
Converts data of type unsigned short to unsigned byte.
|
Modifier and Type | Class and Description |
---|---|
class |
FloatFromUnsignedByte |
class |
FloatFromUnsignedInt |
class |
ToFloat
Base class for implementations of
ConvertTo that convert to float buffers. |
Modifier and Type | Class and Description |
---|---|
class |
ToUnsignedInt
Base class for implementations of
ConvertTo that convert to unsigned int buffers. |
class |
UnsignedIntFromUnsignedInt |
Modifier and Type | Class and Description |
---|---|
class |
ToUnsignedShort
Base class for implementations of
ConvertTo that convert to unsigned short
buffers. |
class |
UnsignedShortFromSignedShort |
class |
UnsignedShortFromUnsignedShort |
Copyright © 2010–2023 Owen Feehan, ETH Zurich, University of Zurich, Hoffmann-La Roche. All rights reserved.