org.anchoranalysis.annotation.io.mark |
Reading and writing Mark -related annotations from/to the
file-system.
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org.anchoranalysis.annotation.mark |
Annotations that use one or more marks to describe entities in an image.
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org.anchoranalysis.mpp.bean.mark.factory |
Beans related to creating Mark s.
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org.anchoranalysis.mpp.bean.points |
Operations based on sets of points.
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org.anchoranalysis.mpp.bean.points.fitter |
Fitting structures to sets of points.
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org.anchoranalysis.mpp.bean.proposer |
Proposing Mark s or other data-structures with particular
attributes.
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org.anchoranalysis.mpp.feature.addcriteria |
Criteria for adding edges during optimization of marked-point-processes.
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org.anchoranalysis.mpp.feature.bean.mark |
Features calculated on a Mark .
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org.anchoranalysis.mpp.feature.bean.mark.collection |
Features calculated on a org.anchoranalysis.mpp.feature.bean.mark.collection .
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org.anchoranalysis.mpp.feature.energy |
Non-bean classes pertaining to calculating energy during an energy-minimization optimization
scheme.
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org.anchoranalysis.mpp.feature.energy.marks |
Non-bean classes pertaining to calculating energy of {org.anchoranalysis.mpp.mark.Mark}s.
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org.anchoranalysis.mpp.feature.energy.saved |
Saved snapshots of energy-calculations.
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org.anchoranalysis.mpp.feature.mark |
Non-bean classes for calculating feature-values related to Mark s.
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org.anchoranalysis.mpp.init |
Parameters used to initialize certain types of beans.
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org.anchoranalysis.mpp.io.input |
Non-beans for reading data structures related to marked point processes from the file system.
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org.anchoranalysis.mpp.io.marks |
Non-beans to help write visualization of Mark s to the
filesystem.
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org.anchoranalysis.mpp.io.marks.generator |
Generator base classes to help write visualization of
Mark s to the filesystem.
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org.anchoranalysis.mpp.mark |
Non-bean classes related to Mark s.
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org.anchoranalysis.mpp.mark.conic |
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org.anchoranalysis.mpp.mark.points |
Mark s implementing structures based on points.
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org.anchoranalysis.mpp.mark.voxelized |
A mark after a voxel-representation has been inferred.
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org.anchoranalysis.mpp.mark.voxelized.memo |
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org.anchoranalysis.mpp.overlay |
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org.anchoranalysis.mpp.pair |
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org.anchoranalysis.mpp.proposer |
Non-bean classes for proposing Mark s or other data-structures
with particular attributes.
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org.anchoranalysis.mpp.proposer.error |
Recording errors related to proposing Mark s or other
data-structures with particular attributes.
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org.anchoranalysis.mpp.segment.bean |
Beans for segmentation algorithms related to marked-point-processes.
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org.anchoranalysis.mpp.segment.bean.optimization.kernel |
Base classes for kernels that transition a configuration of marks (a MarkCollection ) into an altered version.
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org.anchoranalysis.plugin.mpp.bean.check |
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org.anchoranalysis.plugin.mpp.bean.proposer.mark.collection |
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org.anchoranalysis.plugin.mpp.bean.proposer.mark.single |
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org.anchoranalysis.plugin.mpp.bean.proposer.mark.single.fromcollection |
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org.anchoranalysis.plugin.mpp.bean.proposer.merge |
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org.anchoranalysis.plugin.mpp.bean.proposer.orientation |
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org.anchoranalysis.plugin.mpp.bean.proposer.points |
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org.anchoranalysis.plugin.mpp.bean.proposer.radii |
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org.anchoranalysis.plugin.mpp.bean.proposer.split |
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org.anchoranalysis.plugin.mpp.bean.provider.collection |
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org.anchoranalysis.plugin.mpp.bean.provider.single |
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org.anchoranalysis.plugin.mpp.bean.region |
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org.anchoranalysis.plugin.mpp.feature.bean.memo.all |
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org.anchoranalysis.plugin.mpp.segment.bean.kernel.dependent.mark |
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org.anchoranalysis.plugin.mpp.segment.bean.kernel.independent |
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org.anchoranalysis.plugin.mpp.segment.bean.kernel.independent.voxelized |
Implementations of KernelBirth that are
independent but use the voxelized state of a Mark .
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org.anchoranalysis.plugin.mpp.segment.bean.marks |
Beans to perform segmentation involving Mark s and related
classes.
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org.anchoranalysis.plugin.mpp.segment.bean.marks.dual |
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org.anchoranalysis.plugin.mpp.segment.bean.marks.partition |
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org.anchoranalysis.plugin.mpp.segment.bean.marks.voxelized |
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org.anchoranalysis.plugin.mpp.segment.bean.marks.weight |
Deriving a weight for a Mark .
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org.anchoranalysis.plugin.mpp.segment.bean.optimization.reporter |
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org.anchoranalysis.plugin.mpp.segment.kernel.updater |
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org.anchoranalysis.plugin.mpp.segment.optimization |
Non-bean classes to help with optimization in org.anchoranalysis.plugin.mpp.segment.bean.optimization and sub-packages.
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org.anchoranalysis.plugin.points.bean |
Beans that fit or otherwise manipulate sets of points.
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org.anchoranalysis.plugin.points.bean.fitter |
Fitting geometric structures to points.
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