Package | Description |
---|---|
org.anchoranalysis.bean |
Defining, loading, initializing Anchor Beans.
|
org.anchoranalysis.bean.permute.property |
Applying permutations to the properties of a bean.
|
org.anchoranalysis.bean.xml |
Reading Beans from XML files.
|
org.anchoranalysis.bean.xml.factory |
Custom factories for loading beans in custom ways from XML.
|
org.anchoranalysis.image.bean.displayer | |
org.anchoranalysis.image.bean.spatial.arrange.align |
Aligning a
BoundingBox to fit inside another BoundingBox . |
org.anchoranalysis.image.bean.spatial.arrange.fill |
Montages images together to completely fill the available space, while preserving aspect ratio.
|
org.anchoranalysis.image.feature.bean.evaluator |
Beans that define context (which feature, which energy-stack) for evaluating feature-inputs.
|
org.anchoranalysis.io.input.bean.path |
Beans pertaining to manipulating and matching against file-paths.
|
org.anchoranalysis.io.input.bean.path.matcher |
Beans to find a subset of files that match a particular conditions on their paths.
|
org.anchoranalysis.io.output.bean |
Beans for the framework around writing files to the file-system.
|
org.anchoranalysis.mpp.segment.optimization.feedback |
Non-bean classes used in
org.anchoranalysis.mpp.segment.bean.optimization.feedback |
org.anchoranalysis.plugin.image.bean.channel.provider |
Implementations of
ChannelProvider that are
generic base-classes or otherwise abstract or general. |
org.anchoranalysis.plugin.image.bean.channel.provider.slice |
Implementations of
ChannelProvider that process 3D
channels slice-by-slice. |
org.anchoranalysis.plugin.image.bean.object.provider.morphological |
Implementations of
ObjectCollectionProvider
involving morphological operations. |
org.anchoranalysis.plugin.image.bean.segment.binary |
Implementations of
BinarySegmentation . |
org.anchoranalysis.plugin.image.bean.stack.provider |
Implementations of
StackProvider . |
org.anchoranalysis.plugin.image.bean.stack.provider.color |
Implementations of
StackProvider that color
portions of an image. |
org.anchoranalysis.plugin.image.feature.bean.list.permute |
Implementations of
FeatureListProvider that derive
new features with permuted property-values. |
org.anchoranalysis.plugin.image.feature.bean.object.combine |
Features from combinations of
ObjectMask s. |
org.anchoranalysis.plugin.image.feature.bean.object.pair |
Features from pairs of
ObjectMask s. |
org.anchoranalysis.plugin.image.feature.bean.object.single.intensity |
Implementations of
FeatureSingleObject that measure an object's
intensity on a corresponding Channel . |
org.anchoranalysis.plugin.io.bean.file.namer |
Implementations of
FileNamer . |
org.anchoranalysis.plugin.opencv.bean.feature |
Extracting features using OpenCV.
|
org.anchoranalysis.plugin.opencv.bean.stack | |
org.anchoranalysis.plugin.operator.feature.bean |
Features that combine or convert other features in a generic way.
|
org.anchoranalysis.plugin.quick.bean.experiment |
Quickly defining experiments via several assumptions, including particular file-paths.
|
org.anchoranalysis.plugin.quick.bean.input |
Specifying inputs when quickly defining an experiment.
|
org.anchoranalysis.plugin.quick.bean.structure |
Specifying a structure of subdirectories and filenames when quickly defining an experiment.
|
Modifier and Type | Method and Description |
---|---|
void |
BeanInstanceMap.addFrom(BeanInstanceMap other)
Populates the entries from another BeanInstanceMap
|
void |
AnchorBean.checkMisconfigured(BeanInstanceMap defaultInstances)
Checks that a bean's properties conform to expectations.
|
Modifier and Type | Method and Description |
---|---|
void |
SequenceInteger.checkMisconfigured(BeanInstanceMap defaultInstances) |
Modifier and Type | Method and Description |
---|---|
static BeanInstanceMap |
RegisterBeanFactories.getDefaultInstances()
Default instances of different family-types of beans.
|
Modifier and Type | Method and Description |
---|---|
BeanInstanceMap |
AnchorDefaultBeanFactory.getDefaultInstances()
Default bean-classes to use for particular family types of beans.
|
Constructor and Description |
---|
AnchorDefaultBeanFactory(BeanInstanceMap defaultInstances) |
ReplacePropertyBeanFactory(BeanInstanceMap defaultInstances) |
Modifier and Type | Method and Description |
---|---|
void |
IntensityQuantiles.checkMisconfigured(BeanInstanceMap defaultInstances) |
Modifier and Type | Method and Description |
---|---|
void |
Align.checkMisconfigured(BeanInstanceMap defaultInstances) |
Modifier and Type | Method and Description |
---|---|
void |
Fill.checkMisconfigured(BeanInstanceMap defaultInstances) |
Modifier and Type | Method and Description |
---|---|
void |
FeatureEvaluator.checkMisconfigured(BeanInstanceMap defaultInstances) |
Modifier and Type | Method and Description |
---|---|
void |
NameElementRange.checkMisconfigured(BeanInstanceMap defaultInstances) |
Modifier and Type | Method and Description |
---|---|
void |
MatchRegularExpression.checkMisconfigured(BeanInstanceMap defaultInstances) |
Modifier and Type | Method and Description |
---|---|
void |
OutputWriteSettings.checkMisconfigured(BeanInstanceMap defaultInstances) |
void |
OutputWriteSettings.initialize(BeanInstanceMap defaultInstances) |
Modifier and Type | Method and Description |
---|---|
void |
FeedbackReceiver.checkMisconfigured(BeanInstanceMap defaultInstances) |
Modifier and Type | Method and Description |
---|---|
void |
FromStack.checkMisconfigured(BeanInstanceMap defaultInstances) |
Modifier and Type | Method and Description |
---|---|
void |
ExtractSliceRange.checkMisconfigured(BeanInstanceMap defaultInstances) |
Modifier and Type | Method and Description |
---|---|
void |
Erode.checkMisconfigured(BeanInstanceMap defaultInstances) |
Modifier and Type | Method and Description |
---|---|
void |
Sequence.checkMisconfigured(BeanInstanceMap defaultInstances) |
Modifier and Type | Method and Description |
---|---|
void |
FromChannelOrMask.checkMisconfigured(BeanInstanceMap defaultInstances) |
Modifier and Type | Method and Description |
---|---|
void |
ThreeChannels.checkMisconfigured(BeanInstanceMap defaultInstances) |
void |
ThreeColoredObjects.checkMisconfigured(BeanInstanceMap defaultInstances) |
Modifier and Type | Method and Description |
---|---|
void |
PermuteFeatureSequenceInteger.checkMisconfigured(BeanInstanceMap defaultInstances) |
void |
PermuteFeature.checkMisconfigured(BeanInstanceMap defaultInstances) |
Modifier and Type | Method and Description |
---|---|
void |
CombineObjectsForFeatures.checkMisconfigured(BeanInstanceMap defaultInstances) |
Modifier and Type | Method and Description |
---|---|
void |
Intersection.checkMisconfigured(BeanInstanceMap defaultInstances) |
Modifier and Type | Method and Description |
---|---|
void |
IntensityMeanShellBase.checkMisconfigured(BeanInstanceMap defaultInstances) |
Modifier and Type | Method and Description |
---|---|
void |
LastDirectories.checkMisconfigured(BeanInstanceMap defaultInstances) |
Modifier and Type | Method and Description |
---|---|
void |
HOGFeature.checkMisconfigured(BeanInstanceMap defaultInstances) |
Modifier and Type | Method and Description |
---|---|
void |
OpenCVReader.checkMisconfigured(BeanInstanceMap defaultInstances) |
Modifier and Type | Method and Description |
---|---|
void |
FromDictionary.checkMisconfigured(BeanInstanceMap defaultInstances) |
Modifier and Type | Method and Description |
---|---|
void |
QuickExperiment.checkMisconfigured(BeanInstanceMap defaultInstances) |
void |
QuickMultiDatasetExperiment.checkMisconfigured(BeanInstanceMap defaultInstances) |
Modifier and Type | Method and Description |
---|---|
void |
MultiInputManagerQuick.checkMisconfigured(BeanInstanceMap defaultInstances) |
void |
NamedChannelsQuick.checkMisconfigured(BeanInstanceMap defaultInstances) |
Modifier and Type | Method and Description |
---|---|
void |
ExperimentStructure.checkMisconfigured(BeanInstanceMap defaultInstances) |
void |
QuickMultiDatasetStructuredExperiment.checkMisconfigured(BeanInstanceMap defaultInstances) |
void |
ExperimentResultsExperimentStructure.checkMisconfigured(BeanInstanceMap defaultInstances) |
Copyright © 2010–2023 Owen Feehan, ETH Zurich, University of Zurich, Hoffmann-La Roche. All rights reserved.