Package | Description |
---|---|
org.anchoranalysis.experiment.bean.task |
Defines a task,
which is a set of operations run on an input, that may or may not generate an output.
|
org.anchoranalysis.experiment.task |
Non-bean classes related to a
Task . |
org.anchoranalysis.launcher.run.tasks |
Loading and displaying pre-defined tasks.
|
org.anchoranalysis.plugin.image.task.bean.format |
Tasks for converting image-formats.
|
org.anchoranalysis.plugin.image.task.bean.labeller |
Associating labels with images.
|
org.anchoranalysis.plugin.image.task.bean.scale |
Tasks to scale an image.
|
org.anchoranalysis.plugin.io.bean.file.copy.naming |
Rules for preserving or changing the naming of files when copying on the file-system.
|
org.anchoranalysis.plugin.mpp.experiment.bean.define |
Tasks that use a
DefineOutputter or related
classes. |
org.anchoranalysis.plugin.mpp.experiment.bean.objects |
Tasks involving
ObjectMask s. |
Modifier and Type | Method and Description |
---|---|
NoSharedState |
TaskWithoutSharedState.beforeAnyJobIsExecuted(Outputter outputter,
ConcurrencyPlan concurrencyPlan,
List<T> inputs,
ParametersExperiment parameters) |
Modifier and Type | Method and Description |
---|---|
void |
TaskWithoutSharedState.afterAllJobsAreExecuted(NoSharedState sharedState,
InputOutputContext context) |
Modifier and Type | Field and Description |
---|---|
static NoSharedState |
NoSharedState.INSTANCE
A singleton instance.
|
Modifier and Type | Method and Description |
---|---|
void |
HelloWorld.doJobOnInput(InputBound<S,NoSharedState> input) |
Modifier and Type | Method and Description |
---|---|
NoSharedState |
ConvertImageFormat.beforeAnyJobIsExecuted(Outputter outputter,
ConcurrencyPlan concurrencyPlan,
List<NamedChannelsInput> inputs,
ParametersExperiment parameters) |
Modifier and Type | Method and Description |
---|---|
void |
ConvertImageFormat.afterAllJobsAreExecuted(NoSharedState sharedState,
InputOutputContext context) |
void |
ConvertImageFormat.endSeries(NoSharedState sharedStateTask,
OutputSequenceIndexed<Stack,String> sharedStateJob,
InputOutputContext context) |
void |
ConvertImageFormat.startSeries(NoSharedState sharedStateTask,
OutputSequenceIndexed<Stack,String> sharedStateJob,
InputOutputContext context) |
Modifier and Type | Method and Description |
---|---|
void |
ConvertImageFormat.doStack(InputBound<NamedChannelsInput,NoSharedState> input,
OutputSequenceIndexed<Stack,String> sharedStateJob,
int seriesIndex,
int numberSeries,
InputOutputContext context) |
Modifier and Type | Method and Description |
---|---|
NoSharedState |
BinaryOutcomeImageLabeller.initialize(Path pathForBinding) |
Modifier and Type | Method and Description |
---|---|
Set<String> |
BinaryOutcomeImageLabeller.allLabels(NoSharedState sharedState) |
String |
DescriptiveNameContainsImageLabeller.labelFor(NoSharedState sharedState,
ProvidesStackInput input,
InputOutputContext context) |
String |
BinaryClassifierImageLabeller.labelFor(NoSharedState sharedState,
ProvidesStackInput input,
InputOutputContext context) |
Modifier and Type | Method and Description |
---|---|
NoSharedState |
ScaleImageIndependently.beforeAnyJobIsExecuted(Outputter outputter,
ConcurrencyPlan concurrencyPlan,
List<StackSequenceInput> inputs,
ParametersExperiment parameters) |
Modifier and Type | Method and Description |
---|---|
protected Stack |
ScaleImageIndependently.scaleStack(Stack stack,
Optional<ImageSizeSuggestion> suggestedSize,
VoxelsResizer voxelsResizer,
NoSharedState sharedState) |
Modifier and Type | Method and Description |
---|---|
NoSharedState |
CopyFilesNamingWithoutSharedState.beforeCopying(Path destinationDirectory,
List<FileWithDirectoryInput> inputs) |
NoSharedState |
PreserveName.beforeCopying(Path destinationDirectory,
List<FileWithDirectoryInput> inputs) |
NoSharedState |
CopyFilesNamingOne.beforeCopying(Path destinationDirectory,
List<FileWithDirectoryInput> inputs) |
Modifier and Type | Method and Description |
---|---|
CopyFilesNaming<NoSharedState> |
CopyFilesNamingOne.getCopyFilesNaming() |
Modifier and Type | Method and Description |
---|---|
Optional<Path> |
PreserveName.destinationPathRelative(File file,
DirectoryWithPrefix outputTarget,
int iter,
CopyContext<NoSharedState> context) |
Optional<Path> |
CopyFilesNamingOne.destinationPathRelative(File file,
DirectoryWithPrefix outputTarget,
int iter,
CopyContext<NoSharedState> context) |
Optional<Path> |
OutputPrefixWithExtension.destinationPathRelative(File file,
DirectoryWithPrefix outputTarget,
int index,
CopyContext<NoSharedState> context) |
void |
CopyFilesNamingOne.setCopyFilesNaming(CopyFilesNaming<NoSharedState> copyFilesNaming) |
Modifier and Type | Method and Description |
---|---|
void |
Develop.doJobOnInput(InputBound<MultiInput,NoSharedState> input) |
Modifier and Type | Method and Description |
---|---|
NoSharedState |
ExportObjectsAsCroppedImages.beforeAnyJobIsExecuted(Outputter outputter,
ConcurrencyPlan concurrencyPlan,
List<MultiInput> inputs,
ParametersExperiment parameters) |
Modifier and Type | Method and Description |
---|---|
void |
ExportObjectsAsCroppedImages.afterAllJobsAreExecuted(NoSharedState sharedState,
InputOutputContext context) |
Modifier and Type | Method and Description |
---|---|
void |
ExportObjectsAsCroppedImages.doJobOnInput(InputBound<MultiInput,NoSharedState> input) |
Copyright © 2010–2023 Owen Feehan, ETH Zurich, University of Zurich, Hoffmann-La Roche. All rights reserved.