Package org.anchoranalysis.plugin.image.task.bean.format.convertstyle

Class ChannelConvertStyle

Object

AnchorBean<ChannelConvertStyle>

ChannelConvertStyle

Direct Known Subclasses:

ExtractToRGB, IndependentChannels, RGBIfNamesMatch

public abstract class ChannelConvertStyle
extends AnchorBean<ChannelConvertStyle>

Converts a channel(s) at a particular timepoint into a stack(s).

Whether each channel becomes its own single-channeled stack, or is combined to form multi-channeled stacks can vary by sub-class implementation.

A unique-name (the channel-name) is assigned for each stack created, including possibly an empty string.

Author:

Owen Feehan

Constructor Summary

Constructors

Constructor	Description
ChannelConvertStyle()

Method Summary

Modifier and Type	Method	Description
abstract NamedStacks	convert(Set<String> channelNames, ChannelGetterForTimepoint channelGetter, Logger logger)	Converts a particular set of channels.

Methods inherited from class org.anchoranalysis.bean.AnchorBean

checkMisconfigured, describeBean, describeChildren, duplicateBean, fields, findFieldsOfClass, getBeanName, getLocalPath, localise, toString

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Details

ChannelConvertStyle

public ChannelConvertStyle()

Method Details

convert

public abstract NamedStacks convert(Set<String> channelNames,
 ChannelGetterForTimepoint channelGetter,
 Logger logger)
                             throws OperationFailedException

Converts a particular set of channels.

Parameters:

channelNames - a set of names of the channels to convert.

channelGetter - gets a particular channel at a particular time-point.

logger - the logger.

Returns:

the results of the conversion.

Throws:

OperationFailedException - if the conversion fails to successfully complete.