Uses of Class
org.anchoranalysis.image.feature.input.FeatureInputSingleObject

Packages that use FeatureInputSingleObject

Package	Description
org.anchoranalysis.image.feature.bean.object.pair	Features that operate on a pair of ObjectMasks.
org.anchoranalysis.image.feature.bean.object.single	Features that operate on a single ObjectMask.
org.anchoranalysis.image.feature.calculation	Reusable implementations of CalculationPart related to images.
org.anchoranalysis.image.feature.calculator	Implementations of FeatureCalculatorMulti related to images, especially to create tables of feature-calculations.
org.anchoranalysis.image.feature.calculator.merged	A particular implementation of FeatureCalculatorMulti for feature-calculations based upon pairs of image-objects.
org.anchoranalysis.image.io.bean.object.feature	Beans to specify the outputting of features into CSV from a ObjectCollection.
org.anchoranalysis.plugin.image.bean.channel.provider.score	Implementations of ChannelProvider that assign a score to particular subregions of a channel.
org.anchoranalysis.plugin.image.bean.object.filter.collective	Implementations of ObjectFilter that assess each element in a collection collectively.
org.anchoranalysis.plugin.image.bean.object.filter.independent	Implementations of ObjectFilter that independently assess each element in a collection.
org.anchoranalysis.plugin.image.bean.object.provider.feature	Implementations of ObjectCollectionProvider involving feature calculation.
org.anchoranalysis.plugin.image.bean.object.provider.merge	Implementations of ObjectCollectionProvider involving merging objects together.
org.anchoranalysis.plugin.image.feature.bean.list.pair	Implementations of FeatureListProvider with input-type FeatureInputPairObjects.
org.anchoranalysis.plugin.image.feature.bean.object.combine	Features from combinations of ObjectMasks.
org.anchoranalysis.plugin.image.feature.bean.object.single	Implementations of FeatureSingleObject.
org.anchoranalysis.plugin.image.feature.bean.object.single.border	Implementations of FeatureSingleObject that determine if an object lies at the border of an image.
org.anchoranalysis.plugin.image.feature.bean.object.single.boundingbox	Implementations of FeatureSingleObject that consider an object's bounding-box.
org.anchoranalysis.plugin.image.feature.bean.object.single.energy	Implementations of FeatureSingleObject that reference a particular Channel in the associated EnergyStack.
org.anchoranalysis.plugin.image.feature.bean.object.single.intensity	Implementations of FeatureSingleObject that measure an object's intensity on a corresponding Channel.
org.anchoranalysis.plugin.image.feature.bean.object.single.intensity.gradient	Implementations of FeatureSingleObject that measure an object's gradient from corresponding Channels storing the gradient.
org.anchoranalysis.plugin.image.feature.bean.object.single.moments	Implementations of FeatureSingleObject based on calculating image moments, with or without image intensity.
org.anchoranalysis.plugin.image.feature.bean.object.single.morphological	Implementations of FeatureSingleObject that implement morphological operations.
org.anchoranalysis.plugin.image.feature.bean.object.single.shape	Implementations of FeatureSingleObject that measure the shape of the ObjectMask.
org.anchoranalysis.plugin.image.feature.bean.object.single.shared	Implementations of FeatureSingleObject that use SharedObjects for calculations.
org.anchoranalysis.plugin.image.feature.bean.object.single.shared.intersecting	Implementations of FeatureSingleObject that use SharedObjects for calculations, and measure the degree of intersection between objects.
org.anchoranalysis.plugin.image.feature.bean.object.single.slice	Implementations of FeatureSingleObject that processes an object slice-by-slice in the z-dimension.
org.anchoranalysis.plugin.image.feature.bean.object.single.surface	Implementations of FeatureSingleObject that measures aspects of the surface of an ObjectMask.
org.anchoranalysis.plugin.image.feature.bean.shared.object	Beans involving SharedObjects and ObjectCollection.
org.anchoranalysis.plugin.image.feature.bean.stack.object	Implementations of FeatureStack that process an ObjectCollection.
org.anchoranalysis.plugin.image.feature.object.calculation.single	Implementations of CalculationPart that that process a single ObjectMask.
org.anchoranalysis.plugin.image.feature.object.calculation.single.morphological	Implementations of CalculationPart that that process a single ObjectMask - with morphological operations.
org.anchoranalysis.plugin.image.object.merge.condition	Conditions for merging ObjectMasks.
org.anchoranalysis.plugin.image.task.bean.segment	Tasks to segment an image.
org.anchoranalysis.plugin.image.task.segment	Non-bean classes for image-segmentation.
org.anchoranalysis.plugin.points.bean.feature	Features related to points and fitting points to conics.
org.anchoranalysis.plugin.points.calculate.ellipse	CalculationPart related to fitting ellipses to points by least-squares.
org.anchoranalysis.plugin.points.calculate.ellipsoid	CalculationPart related to fitting ellipsoids to points by least-squares.
org.anchoranalysis.test.feature.plugins.mockfeature	A mocked feature internally using a feature-calculation.

Uses of FeatureInputSingleObject in org.anchoranalysis.image.feature.bean.object.pair

Methods in org.anchoranalysis.image.feature.bean.object.pair that return types with arguments of type FeatureInputSingleObject

Modifier and Type	Method	Description
Feature<FeatureInputSingleObject>	FeatureDeriveFromPair.getItem()	The feature to be applied to individual objects.

Method parameters in org.anchoranalysis.image.feature.bean.object.pair with type arguments of type FeatureInputSingleObject

Modifier and Type	Method	Description
void	FeatureDeriveFromPair.setItem(Feature<FeatureInputSingleObject> item)	The feature to be applied to individual objects.

Constructor parameters in org.anchoranalysis.image.feature.bean.object.pair with type arguments of type FeatureInputSingleObject

Modifier	Constructor	Description
	FeatureDeriveFromPair(Feature<FeatureInputSingleObject> item)	Creates a new FeatureDeriveFromPair instance.
	First(Feature<FeatureInputSingleObject> item)	Creates a new instance that will evaluate the given feature on the first object of a pair.
	Merged(Feature<FeatureInputSingleObject> item)	Creates a new instance that will evaluate the given feature on the merged object of a pair.
	Minimum(Feature<FeatureInputSingleObject> item)	Creates a new instance that will calculate the minimum feature value from a pair of objects.
	Second(Feature<FeatureInputSingleObject> item)	Creates a new instance that will evaluate the given feature on the second object of a pair.

Uses of FeatureInputSingleObject in org.anchoranalysis.image.feature.bean.object.single

Method parameters in org.anchoranalysis.image.feature.bean.object.single with type arguments of type FeatureInputSingleObject

Modifier and Type	Method	Description
double	CenterOfGravity.calculate(FeatureCalculationInput<FeatureInputSingleObject> input)
double	NumberVoxels.calculate(FeatureCalculationInput<FeatureInputSingleObject> input)

Uses of FeatureInputSingleObject in org.anchoranalysis.image.feature.calculation

Methods in org.anchoranalysis.image.feature.calculation that return FeatureInputSingleObject

Modifier and Type	Method	Description
protected FeatureInputSingleObject	CalculateInputFromPair.execute(FeatureInputPairObjects input)	Executes the calculation to extract a single object from the pair.

Methods in org.anchoranalysis.image.feature.calculation with parameters of type FeatureInputSingleObject

Modifier and Type	Method	Description
Double	CalculateNumberVoxels.execute(FeatureInputSingleObject input)	Executes the calculation to count the number of voxels in the object.

Uses of FeatureInputSingleObject in org.anchoranalysis.image.feature.calculator

Methods in org.anchoranalysis.image.feature.calculator that return types with arguments of type FeatureInputSingleObject

Modifier and Type	Method	Description
FeatureTableCalculator<FeatureInputSingleObject>	SingleTableCalculator.duplicateForNewThread()

Methods in org.anchoranalysis.image.feature.calculator with parameters of type FeatureInputSingleObject

Modifier and Type	Method	Description
ResultsVector	SingleTableCalculator.calculate(FeatureInputSingleObject input)
ResultsVector	SingleTableCalculator.calculate(FeatureInputSingleObject input, FeatureList<FeatureInputSingleObject> featuresSubset)
ResultsVector	SingleTableCalculator.calculateSuppressErrors(FeatureInputSingleObject input, ErrorReporter errorReporter)

Method parameters in org.anchoranalysis.image.feature.calculator with type arguments of type FeatureInputSingleObject

Modifier and Type	Method	Description
ResultsVector	SingleTableCalculator.calculate(FeatureInputSingleObject input, FeatureList<FeatureInputSingleObject> featuresSubset)

Constructor parameters in org.anchoranalysis.image.feature.calculator with type arguments of type FeatureInputSingleObject

Modifier	Constructor	Description
	SingleTableCalculator(NamedFeatureStore<FeatureInputSingleObject> namedFeatureStore)	Creates a new SingleTableCalculator instance.

Uses of FeatureInputSingleObject in org.anchoranalysis.image.feature.calculator.merged

Methods in org.anchoranalysis.image.feature.calculator.merged that return types with arguments of type FeatureInputSingleObject

Modifier and Type	Method	Description
FeatureCalculatorMulti<FeatureInputSingleObject>	MergedPairsFeatures.createSingle(CreateCalculatorHelper calculatorCreator, ImageInitialization initialization, BoundReplaceStrategy<FeatureInputSingleObject,CacheAndReuseStrategy<FeatureInputSingleObject>> cachingStrategy)	Creates a feature calculator for single object features.
FeatureList<FeatureInputSingleObject>	MergedPairsFeatures.getSingle()

Method parameters in org.anchoranalysis.image.feature.calculator.merged with type arguments of type FeatureInputSingleObject

Modifier and Type	Method	Description
FeatureCalculatorMulti<FeatureInputSingleObject>	MergedPairsFeatures.createSingle(CreateCalculatorHelper calculatorCreator, ImageInitialization initialization, BoundReplaceStrategy<FeatureInputSingleObject,CacheAndReuseStrategy<FeatureInputSingleObject>> cachingStrategy)	Creates a feature calculator for single object features.
FeatureCalculatorMulti<FeatureInputSingleObject>	MergedPairsFeatures.createSingle(CreateCalculatorHelper calculatorCreator, ImageInitialization initialization, BoundReplaceStrategy<FeatureInputSingleObject,CacheAndReuseStrategy<FeatureInputSingleObject>> cachingStrategy)	Creates a feature calculator for single object features.

Uses of FeatureInputSingleObject in org.anchoranalysis.image.io.bean.object.feature

Methods in org.anchoranalysis.image.io.bean.object.feature that return types with arguments of type FeatureInputSingleObject

Modifier and Type	Method	Description
FeatureListEvaluator<FeatureInputSingleObject>	OutputFeatureTable.getFeature()	A list of features to calculate in an evaluation context.

Method parameters in org.anchoranalysis.image.io.bean.object.feature with type arguments of type FeatureInputSingleObject

Modifier and Type	Method	Description
void	OutputFeatureTable.setFeature(FeatureListEvaluator<FeatureInputSingleObject> feature)	A list of features to calculate in an evaluation context.

Uses of FeatureInputSingleObject in org.anchoranalysis.plugin.image.bean.channel.provider.score

Methods in org.anchoranalysis.plugin.image.bean.channel.provider.score that return types with arguments of type FeatureInputSingleObject

Modifier and Type	Method	Description
Feature<FeatureInputSingleObject>	ScoreObjects.getFeature()	Feature that calculates the score for an object.

Method parameters in org.anchoranalysis.plugin.image.bean.channel.provider.score with type arguments of type FeatureInputSingleObject

Modifier and Type	Method	Description
void	ScoreObjects.setFeature(Feature<FeatureInputSingleObject> feature)	Feature that calculates the score for an object.

Uses of FeatureInputSingleObject in org.anchoranalysis.plugin.image.bean.object.filter.collective

Methods in org.anchoranalysis.plugin.image.bean.object.filter.collective that return types with arguments of type FeatureInputSingleObject

Modifier and Type	Method	Description
FeatureEvaluator<FeatureInputSingleObject>	DiscardOutliers.getFeatureEvaluator()
FeatureEvaluator<FeatureInputSingleObject>	RelationWithMatches.getFeatureEvaluator()
FeatureEvaluator<FeatureInputSingleObject>	RelationWithMatches.getFeatureEvaluatorMatch()

Method parameters in org.anchoranalysis.plugin.image.bean.object.filter.collective with type arguments of type FeatureInputSingleObject

Modifier and Type	Method	Description
void	DiscardOutliers.setFeatureEvaluator(FeatureEvaluator<FeatureInputSingleObject> featureEvaluator)
void	RelationWithMatches.setFeatureEvaluator(FeatureEvaluator<FeatureInputSingleObject> featureEvaluator)
void	RelationWithMatches.setFeatureEvaluatorMatch(FeatureEvaluator<FeatureInputSingleObject> featureEvaluatorMatch)

Uses of FeatureInputSingleObject in org.anchoranalysis.plugin.image.bean.object.filter.independent

Methods in org.anchoranalysis.plugin.image.bean.object.filter.independent that return types with arguments of type FeatureInputSingleObject

Modifier and Type	Method	Description
FeatureEvaluator<FeatureInputSingleObject>	ThresholdedFeature.getFeatureEvaluator()

Method parameters in org.anchoranalysis.plugin.image.bean.object.filter.independent with type arguments of type FeatureInputSingleObject

Modifier and Type	Method	Description
void	ThresholdedFeature.setFeatureEvaluator(FeatureEvaluator<FeatureInputSingleObject> featureEvaluator)

Uses of FeatureInputSingleObject in org.anchoranalysis.plugin.image.bean.object.provider.feature

Methods in org.anchoranalysis.plugin.image.bean.object.provider.feature that return types with arguments of type FeatureInputSingleObject

Modifier and Type	Method	Description
protected FeatureCalculatorSingle<FeatureInputSingleObject>	ObjectCollectionProviderWithFeature.createSession()	Creates a feature calculation session for single objects.
FeatureEvaluator<FeatureInputSingleObject>	ObjectCollectionProviderWithFeature.getFeatureEvaluator()	The feature evaluator used to calculate features for single objects.

Method parameters in org.anchoranalysis.plugin.image.bean.object.provider.feature with type arguments of type FeatureInputSingleObject

Modifier and Type	Method	Description
void	ObjectCollectionProviderWithFeature.setFeatureEvaluator(FeatureEvaluator<FeatureInputSingleObject> featureEvaluator)	The feature evaluator used to calculate features for single objects.

Uses of FeatureInputSingleObject in org.anchoranalysis.plugin.image.bean.object.provider.merge

Methods in org.anchoranalysis.plugin.image.bean.object.provider.merge that return types with arguments of type FeatureInputSingleObject

Modifier and Type	Method	Description
FeatureEvaluator<FeatureInputSingleObject>	MergeGreedyToIncreaseObjectFeature.getFeatureEvaluator()
FeatureEvaluator<FeatureInputSingleObject>	MergeToIncreaseObjectFeature.getFeatureEvaluator()

Method parameters in org.anchoranalysis.plugin.image.bean.object.provider.merge with type arguments of type FeatureInputSingleObject

Modifier and Type	Method	Description
void	MergeGreedyToIncreaseObjectFeature.setFeatureEvaluator(FeatureEvaluator<FeatureInputSingleObject> featureEvaluator)
void	MergeToIncreaseObjectFeature.setFeatureEvaluator(FeatureEvaluator<FeatureInputSingleObject> featureEvaluator)

Uses of FeatureInputSingleObject in org.anchoranalysis.plugin.image.feature.bean.list.pair

Methods in org.anchoranalysis.plugin.image.feature.bean.list.pair that return types with arguments of type FeatureInputSingleObject

Modifier and Type	Method	Description
FeatureListProvider<FeatureInputSingleObject>	DeriveFromPair.getItem()
FeatureListProvider<FeatureInputSingleObject>	FeatureListProviderAggregatePair.getItem()	For each feature in the list, a corresponding aggregate feature is created in the output list.

Method parameters in org.anchoranalysis.plugin.image.feature.bean.list.pair with type arguments of type FeatureInputSingleObject

Modifier and Type	Method	Description
void	DeriveFromPair.setItem(FeatureListProvider<FeatureInputSingleObject> item)
void	FeatureListProviderAggregatePair.setItem(FeatureListProvider<FeatureInputSingleObject> item)	For each feature in the list, a corresponding aggregate feature is created in the output list.

Uses of FeatureInputSingleObject in org.anchoranalysis.plugin.image.feature.bean.object.combine

Methods in org.anchoranalysis.plugin.image.feature.bean.object.combine that return types with arguments of type FeatureInputSingleObject

Modifier and Type	Method	Description
FeatureTableCalculator<FeatureInputSingleObject>	EachObjectIndependently.createFeatures(List<NamedBean<FeatureListProvider<FeatureInputSingleObject>>> list, NamedFeatureStoreFactory storeFactory, boolean suppressErrors)
FeatureTableCalculator<FeatureInputSingleObject>	EachObjectIndependently.createFeatures(NamedFeatureStore<FeatureInputSingleObject> features)	Creates a FeatureTableCalculator from a NamedFeatureStore.
List<FeatureInputSingleObject>	EachObjectIndependently.startBatchDeriveInputs(ObjectCollection objects, EnergyStack energyStack, Logger logger)

Methods in org.anchoranalysis.plugin.image.feature.bean.object.combine with parameters of type FeatureInputSingleObject

Modifier and Type	Method	Description
protected BoundingBox	EachObjectIndependently.boundingBoxThatSpansInput(FeatureInputSingleObject input)
ObjectCollection	EachObjectIndependently.objectsForThumbnail(FeatureInputSingleObject input)
String	EachObjectIndependently.uniqueIdentifierFor(FeatureInputSingleObject input)

Method parameters in org.anchoranalysis.plugin.image.feature.bean.object.combine with type arguments of type FeatureInputSingleObject

Modifier and Type	Method	Description
abstract FeatureTableCalculator<T>	CombineObjectsForFeatures.createFeatures(List<NamedBean<FeatureListProvider<FeatureInputSingleObject>>> featuresSingleObject, NamedFeatureStoreFactory storeFactory, boolean suppressErrors)	Creates features that will be applied on the objects.
FeatureTableCalculator<FeatureInputSingleObject>	EachObjectIndependently.createFeatures(List<NamedBean<FeatureListProvider<FeatureInputSingleObject>>> list, NamedFeatureStoreFactory storeFactory, boolean suppressErrors)
FeatureTableCalculator<FeatureInputSingleObject>	EachObjectIndependently.createFeatures(NamedFeatureStore<FeatureInputSingleObject> features)	Creates a FeatureTableCalculator from a NamedFeatureStore.
FeatureTableCalculator<FeatureInputPairObjects>	PairNeighbors.createFeatures(List<NamedBean<FeatureListProvider<FeatureInputSingleObject>>> list, NamedFeatureStoreFactory storeFactory, boolean suppressErrors)

Uses of FeatureInputSingleObject in org.anchoranalysis.plugin.image.feature.bean.object.single

Method parameters in org.anchoranalysis.plugin.image.feature.bean.object.single with type arguments of type FeatureInputSingleObject

Modifier and Type	Method	Description
double	ArbitraryInsidePoint.calculate(FeatureCalculationInput<FeatureInputSingleObject> input)
protected double	OutlineKernelBase.calculate(FeatureCalculationInput<FeatureInputSingleObject> input)

Uses of FeatureInputSingleObject in org.anchoranalysis.plugin.image.feature.bean.object.single.border

Method parameters in org.anchoranalysis.plugin.image.feature.bean.object.single.border with type arguments of type FeatureInputSingleObject

Modifier and Type	Method	Description
double	AtBorderBase.calculate(FeatureCalculationInput<FeatureInputSingleObject> input)

Uses of FeatureInputSingleObject in org.anchoranalysis.plugin.image.feature.bean.object.single.boundingbox

Method parameters in org.anchoranalysis.plugin.image.feature.bean.object.single.boundingbox with type arguments of type FeatureInputSingleObject

Modifier and Type	Method	Description
double	BoundingBoxAlongAxisBase.calculate(FeatureCalculationInput<FeatureInputSingleObject> input)
double	BoundingBoxNumberVoxels.calculate(FeatureCalculationInput<FeatureInputSingleObject> input)

Uses of FeatureInputSingleObject in org.anchoranalysis.plugin.image.feature.bean.object.single.energy

Method parameters in org.anchoranalysis.plugin.image.feature.bean.object.single.energy with type arguments of type FeatureInputSingleObject

Modifier and Type	Method	Description
double	SpecificEnergyChannelBase.calculate(FeatureCalculationInput<FeatureInputSingleObject> input)

Uses of FeatureInputSingleObject in org.anchoranalysis.plugin.image.feature.bean.object.single.intensity

Method parameters in org.anchoranalysis.plugin.image.feature.bean.object.single.intensity with type arguments of type FeatureInputSingleObject

Modifier and Type	Method	Description
double	FeatureEnergyChannel.calculate(FeatureCalculationInput<FeatureInputSingleObject> input)
protected abstract double	FeatureEnergyChannel.calculateForChannel(FeatureCalculationInput<FeatureInputSingleObject> input, Channel channel)	Calculates the feature value for a specific channel in the energy stack.
protected double	Intensity.calculateForChannel(FeatureCalculationInput<FeatureInputSingleObject> input, Channel channel)
protected double	IntensityMeanMaxSlice.calculateForChannel(FeatureCalculationInput<FeatureInputSingleObject> input, Channel channel)	Calculates the maximum mean intensity across all slices of the object in the given channel.
protected double	IntensityMeanShellBase.calculateForChannel(FeatureCalculationInput<FeatureInputSingleObject> input, Channel channel)
protected double	TextureScore.calculateForChannel(FeatureCalculationInput<FeatureInputSingleObject> input, Channel channel)

Uses of FeatureInputSingleObject in org.anchoranalysis.plugin.image.feature.bean.object.single.intensity.gradient

Methods in org.anchoranalysis.plugin.image.feature.bean.object.single.intensity.gradient that return types with arguments of type FeatureInputSingleObject

Modifier and Type	Method	Description
protected CalculationPart<List<Point3d>,FeatureInputSingleObject>	IntensityGradientBase.gradientCalculation()	Creates a CalculationPart for calculating the gradient from the specified channels.

Method parameters in org.anchoranalysis.plugin.image.feature.bean.object.single.intensity.gradient with type arguments of type FeatureInputSingleObject

Modifier and Type	Method	Description
double	GradientMagnitude.calculate(FeatureCalculationInput<FeatureInputSingleObject> input)
double	GradientMeanForAxis.calculate(FeatureCalculationInput<FeatureInputSingleObject> input)

Uses of FeatureInputSingleObject in org.anchoranalysis.plugin.image.feature.bean.object.single.moments

Method parameters in org.anchoranalysis.plugin.image.feature.bean.object.single.moments with type arguments of type FeatureInputSingleObject

Modifier and Type	Method	Description
double	ImageMomentsBase.calculate(FeatureCalculationInput<FeatureInputSingleObject> input)

Uses of FeatureInputSingleObject in org.anchoranalysis.plugin.image.feature.bean.object.single.morphological

Methods in org.anchoranalysis.plugin.image.feature.bean.object.single.morphological that return types with arguments of type FeatureInputSingleObject

Modifier and Type	Method	Description
protected abstract CalculationPart<ObjectMask,FeatureInputSingleObject>	DerivedObject.createCachedCalculationForDerived(CalculationPartResolver<FeatureInputSingleObject> session)	Creates a CalculationPart for deriving the object mask.
protected CalculationPart<ObjectMask,FeatureInputSingleObject>	Erode.createCachedCalculationForDerived(CalculationPartResolver<FeatureInputSingleObject> session)	Creates a CalculationPart for eroding the object mask.
protected CalculationPart<ObjectMask,FeatureInputSingleObject>	Shell.createCachedCalculationForDerived(CalculationPartResolver<FeatureInputSingleObject> session)
Feature<FeatureInputSingleObject>	DerivedObject.getItem()	The feature to calculate on the derived object.

Method parameters in org.anchoranalysis.plugin.image.feature.bean.object.single.morphological with type arguments of type FeatureInputSingleObject

Modifier and Type	Method	Description
double	DerivedObject.calculate(FeatureCalculationInput<FeatureInputSingleObject> input)
double	NumberRemovedVoxelsAfterClosing.calculate(FeatureCalculationInput<FeatureInputSingleObject> input)
protected abstract CalculationPart<ObjectMask,FeatureInputSingleObject>	DerivedObject.createCachedCalculationForDerived(CalculationPartResolver<FeatureInputSingleObject> session)	Creates a CalculationPart for deriving the object mask.
protected CalculationPart<ObjectMask,FeatureInputSingleObject>	Erode.createCachedCalculationForDerived(CalculationPartResolver<FeatureInputSingleObject> session)	Creates a CalculationPart for eroding the object mask.
protected CalculationPart<ObjectMask,FeatureInputSingleObject>	Shell.createCachedCalculationForDerived(CalculationPartResolver<FeatureInputSingleObject> session)
void	DerivedObject.setItem(Feature<FeatureInputSingleObject> item)	The feature to calculate on the derived object.

Uses of FeatureInputSingleObject in org.anchoranalysis.plugin.image.feature.bean.object.single.shape

Method parameters in org.anchoranalysis.plugin.image.feature.bean.object.single.shape with type arguments of type FeatureInputSingleObject

Modifier and Type	Method	Description
double	ObjectRadiusStandardDeviation.calculate(FeatureCalculationInput<FeatureInputSingleObject> input)
double	ShapeRegularityCenterSlice.calculate(FeatureCalculationInput<FeatureInputSingleObject> input)
double	ShapeRegularityMaximumIntensityProjection.calculate(FeatureCalculationInput<FeatureInputSingleObject> input)

Uses of FeatureInputSingleObject in org.anchoranalysis.plugin.image.feature.bean.object.single.shared

Method parameters in org.anchoranalysis.plugin.image.feature.bean.object.single.shared with type arguments of type FeatureInputSingleObject

Modifier and Type	Method	Description
double	PairedWithMask.calculate(FeatureCalculationInput<FeatureInputSingleObject> input)

Uses of FeatureInputSingleObject in org.anchoranalysis.plugin.image.feature.bean.object.single.shared.intersecting

Methods in org.anchoranalysis.plugin.image.feature.bean.object.single.shared.intersecting with parameters of type FeatureInputSingleObject

Modifier and Type	Method	Description
protected FeatureInputPairObjects	CalculateIntersecting.deriveFromDelegate(FeatureInputSingleObject input, ObjectCollection delegate)

Method parameters in org.anchoranalysis.plugin.image.feature.bean.object.single.shared.intersecting with type arguments of type FeatureInputSingleObject

Modifier and Type	Method	Description
double	FeatureIntersectingObjects.calculate(FeatureCalculationInput<FeatureInputSingleObject> input)
protected abstract double	FeatureIntersectingObjects.valueFor(FeatureCalculationInput<FeatureInputSingleObject> input, ResolvedPart<ObjectCollection,FeatureInputSingleObject> intersecting)	Calculates a value based on the input and the intersecting objects.
protected abstract double	FeatureIntersectingObjects.valueFor(FeatureCalculationInput<FeatureInputSingleObject> input, ResolvedPart<ObjectCollection,FeatureInputSingleObject> intersecting)	Calculates a value based on the input and the intersecting objects.
protected double	FeatureIntersectingObjectsSingleElement.valueFor(FeatureCalculationInput<FeatureInputSingleObject> input, ResolvedPart<ObjectCollection,FeatureInputSingleObject> intersecting)
protected double	FeatureIntersectingObjectsSingleElement.valueFor(FeatureCalculationInput<FeatureInputSingleObject> input, ResolvedPart<ObjectCollection,FeatureInputSingleObject> intersecting)
protected double	NumberIntersectingObjects.valueFor(FeatureCalculationInput<FeatureInputSingleObject> input, ResolvedPart<ObjectCollection,FeatureInputSingleObject> intersecting)
protected double	NumberIntersectingObjects.valueFor(FeatureCalculationInput<FeatureInputSingleObject> input, ResolvedPart<ObjectCollection,FeatureInputSingleObject> intersecting)

Constructor parameters in org.anchoranalysis.plugin.image.feature.bean.object.single.shared.intersecting with type arguments of type FeatureInputSingleObject

Modifier	Constructor	Description
	CalculateIntersecting(ResolvedPart<ObjectCollection,FeatureInputSingleObject> intersecting, int index)	Creates a new CalculateIntersecting instance.

Uses of FeatureInputSingleObject in org.anchoranalysis.plugin.image.feature.bean.object.single.slice

Method parameters in org.anchoranalysis.plugin.image.feature.bean.object.single.slice with type arguments of type FeatureInputSingleObject

Modifier and Type	Method	Description
double	MaximumNumberContourVoxelsOnSlice.calculate(FeatureCalculationInput<FeatureInputSingleObject> input)
double	MaximumNumberVoxelsOnSlice.calculate(FeatureCalculationInput<FeatureInputSingleObject> input)

Uses of FeatureInputSingleObject in org.anchoranalysis.plugin.image.feature.bean.object.single.surface

Methods in org.anchoranalysis.plugin.image.feature.bean.object.single.surface that return types with arguments of type FeatureInputSingleObject

Modifier and Type	Method	Description
protected CalculationPart<Integer,FeatureInputSingleObject>	SurfaceNumberVoxelFaces.createParameters(boolean mip, boolean suppress3d)
protected CalculationPart<Integer,FeatureInputSingleObject>	SurfaceNumberVoxels.createParameters(boolean mip, boolean suppress3d)
protected abstract CalculationPart<Integer,FeatureInputSingleObject>	SurfaceNumberVoxelsBase.createParameters(boolean mip, boolean suppress3d)	Creates the calculation parameters for the surface voxel count.

Method parameters in org.anchoranalysis.plugin.image.feature.bean.object.single.surface with type arguments of type FeatureInputSingleObject

Modifier and Type	Method	Description
double	SurfaceNumberVoxelsBase.calculate(FeatureCalculationInput<FeatureInputSingleObject> input)

Uses of FeatureInputSingleObject in org.anchoranalysis.plugin.image.feature.bean.shared.object

Methods in org.anchoranalysis.plugin.image.feature.bean.shared.object that return types with arguments of type FeatureInputSingleObject

Modifier and Type	Method	Description
Feature<FeatureInputSingleObject>	FeatureSingleObjectFromShared.getItem()	The feature to be calculated on a single object.

Method parameters in org.anchoranalysis.plugin.image.feature.bean.shared.object with type arguments of type FeatureInputSingleObject

Modifier and Type	Method	Description
protected abstract double	FeatureSingleObjectFromShared.calc(CalculateForChild<T> calculateForChild, Feature<FeatureInputSingleObject> featureForSingleObject)	Calculates the feature value for a single object.
protected double	MaskAsSingleObject.calc(CalculateForChild<T> calculateForChild, Feature<FeatureInputSingleObject> featureForSingleObject)
protected double	ObjectAggregationBase.calc(CalculateForChild<T> calculateForChild, Feature<FeatureInputSingleObject> featureForSingleObject)
void	FeatureSingleObjectFromShared.setItem(Feature<FeatureInputSingleObject> item)	The feature to be calculated on a single object.

Uses of FeatureInputSingleObject in org.anchoranalysis.plugin.image.feature.bean.stack.object

Methods in org.anchoranalysis.plugin.image.feature.bean.stack.object that return FeatureInputSingleObject

Modifier and Type	Method	Description
protected FeatureInputSingleObject	CalculateDeriveObjectInput.execute(FeatureInputStack input)

Methods in org.anchoranalysis.plugin.image.feature.bean.stack.object that return types with arguments of type FeatureInputSingleObject

Modifier and Type	Method	Description
Feature<FeatureInputSingleObject>	AsObjectMask.getItem()
Feature<FeatureInputSingleObject>	QuantileAcrossConnectedComponents.getItem()

Method parameters in org.anchoranalysis.plugin.image.feature.bean.stack.object with type arguments of type FeatureInputSingleObject

Modifier and Type	Method	Description
void	AsObjectMask.setItem(Feature<FeatureInputSingleObject> item)
void	QuantileAcrossConnectedComponents.setItem(Feature<FeatureInputSingleObject> item)

Uses of FeatureInputSingleObject in org.anchoranalysis.plugin.image.feature.object.calculation.single

Methods in org.anchoranalysis.plugin.image.feature.object.calculation.single that return types with arguments of type FeatureInputSingleObject

Modifier and Type	Method	Description
static CalculationPart<ObjectMask,FeatureInputSingleObject>	CalculateShellObjectMask.of(CalculationPartResolver<FeatureInputSingleObject> resolver, MorphologicalIterations iterations, int iterationsErosionSecond, boolean inverse)	Creates a new CalculateShellObjectMask instance.

Methods in org.anchoranalysis.plugin.image.feature.object.calculation.single with parameters of type FeatureInputSingleObject

Modifier and Type	Method	Description
protected ObjectMask	CalculateIncrementalOperationMap.execute(FeatureInputSingleObject input, Integer key)
protected ObjectMask	CalculateObjectMask.execute(FeatureInputSingleObject input)
protected ObjectMask	CalculateShellObjectMask.execute(FeatureInputSingleObject input)

Method parameters in org.anchoranalysis.plugin.image.feature.object.calculation.single with type arguments of type FeatureInputSingleObject

Modifier and Type	Method	Description
static CalculationPart<ObjectMask,FeatureInputSingleObject>	CalculateShellObjectMask.of(CalculationPartResolver<FeatureInputSingleObject> resolver, MorphologicalIterations iterations, int iterationsErosionSecond, boolean inverse)	Creates a new CalculateShellObjectMask instance.

Constructor parameters in org.anchoranalysis.plugin.image.feature.object.calculation.single with type arguments of type FeatureInputSingleObject

Modifier	Constructor	Description
protected	CalculateObjectMask(int iterations, ResolvedPartMap<ObjectMask,FeatureInputSingleObject,Integer> map)	Creates a new CalculateObjectMask instance.
	CalculateShellObjectMask(ResolvedPart<ObjectMask,FeatureInputSingleObject> calculateDilation, ResolvedPart<ObjectMask,FeatureInputSingleObject> calculateErosion, int iterationsErosionSecond, boolean do3D, boolean inverse)	Creates a new CalculateShellObjectMask instance.

Uses of FeatureInputSingleObject in org.anchoranalysis.plugin.image.feature.object.calculation.single.morphological

Methods in org.anchoranalysis.plugin.image.feature.object.calculation.single.morphological that return types with arguments of type FeatureInputSingleObject

Modifier and Type	Method	Description
static ResolvedPart<ObjectMask,FeatureInputSingleObject>	CalculateDilation.of(CalculationPartResolver<FeatureInputSingleObject> cache, int iterations, boolean do3D)	Creates a new ResolvedPart for calculating dilation.
static CalculationPart<ObjectMask,FeatureInputSingleObject>	CalculateErosion.of(CalculationPartResolver<FeatureInputSingleObject> cache, int iterations, boolean do3D)	Creates a new CalculationPart for calculating erosion.
static ResolvedPart<ObjectMask,FeatureInputSingleObject>	CalculateErosion.ofResolved(CalculationPartResolver<FeatureInputSingleObject> cache, int iterations, boolean do3D)	Creates a new ResolvedPart for calculating erosion.

Method parameters in org.anchoranalysis.plugin.image.feature.object.calculation.single.morphological with type arguments of type FeatureInputSingleObject

Modifier and Type	Method	Description
static ResolvedPart<ObjectMask,FeatureInputSingleObject>	CalculateDilation.of(CalculationPartResolver<FeatureInputSingleObject> cache, int iterations, boolean do3D)	Creates a new ResolvedPart for calculating dilation.
static CalculationPart<ObjectMask,FeatureInputSingleObject>	CalculateErosion.of(CalculationPartResolver<FeatureInputSingleObject> cache, int iterations, boolean do3D)	Creates a new CalculationPart for calculating erosion.
static ResolvedPart<ObjectMask,FeatureInputSingleObject>	CalculateErosion.ofResolved(CalculationPartResolver<FeatureInputSingleObject> cache, int iterations, boolean do3D)	Creates a new ResolvedPart for calculating erosion.

Uses of FeatureInputSingleObject in org.anchoranalysis.plugin.image.object.merge.condition

Constructor parameters in org.anchoranalysis.plugin.image.object.merge.condition with type arguments of type FeatureInputSingleObject

Modifier	Constructor	Description
	IncreaseFeatureCondition(FeatureEvaluator<FeatureInputSingleObject> featureEvaluator)	Creates a new IncreaseFeatureCondition instance.

Uses of FeatureInputSingleObject in org.anchoranalysis.plugin.image.task.bean.segment

Methods in org.anchoranalysis.plugin.image.task.bean.segment that return types with arguments of type FeatureInputSingleObject

Modifier and Type	Method	Description
List<NamedBean<FeatureListProvider<FeatureInputSingleObject>>>	SegmentInstanceWithModel.getFeatures()	Features to calculate for objects in the features output.

Method parameters in org.anchoranalysis.plugin.image.task.bean.segment with type arguments of type FeatureInputSingleObject

Modifier and Type	Method	Description
void	SegmentInstanceWithModel.setFeatures(List<NamedBean<FeatureListProvider<FeatureInputSingleObject>>> features)	Features to calculate for objects in the features output.

Uses of FeatureInputSingleObject in org.anchoranalysis.plugin.image.task.segment

Methods in org.anchoranalysis.plugin.image.task.segment that return types with arguments of type FeatureInputSingleObject

Modifier and Type	Method	Description
FeatureCalculationContext<FeatureTableCalculator<FeatureInputSingleObject>>	SharedStateSegmentInstance.createCalculationContext(ExecutionTimeRecorder executionTimeRecorder, InputOutputContext ioContext)	Creates a FeatureCalculationContext for calculating features to later use this exporter.

Constructor parameters in org.anchoranalysis.plugin.image.task.segment with type arguments of type FeatureInputSingleObject

Modifier	Constructor	Description
	SharedStateSegmentInstance(ConcurrentModelPool<T> modelPool, FeatureTableCalculator<FeatureInputSingleObject> featureTable, LabelHeaders identifierHeaders, String outputNameFeatures, FeatureExporterContext context)	Creates a new instance of SharedStateSegmentInstance.

Uses of FeatureInputSingleObject in org.anchoranalysis.plugin.points.bean.feature

Methods in org.anchoranalysis.plugin.points.bean.feature with parameters of type FeatureInputSingleObject

Modifier and Type	Method	Description
protected double	AxisRatioEllipsoid.calculateWithEllipsoid(FeatureInputSingleObject input, Ellipsoid ellipsoid)
protected abstract double	EllipsoidBase.calculateWithEllipsoid(FeatureInputSingleObject input, Ellipsoid ellipsoid)	Calculates a feature value based on the fitted Ellipsoid.
protected double	Ellipsoidicity.calculateWithEllipsoid(FeatureInputSingleObject input, Ellipsoid ellipsoid)

Method parameters in org.anchoranalysis.plugin.points.bean.feature with type arguments of type FeatureInputSingleObject

Modifier and Type	Method	Description
double	EllipsoidBase.calculate(FeatureCalculationInput<FeatureInputSingleObject> input)
double	Ellipticity.calculate(FeatureCalculationInput<FeatureInputSingleObject> input)

Uses of FeatureInputSingleObject in org.anchoranalysis.plugin.points.calculate.ellipse

Methods in org.anchoranalysis.plugin.points.calculate.ellipse with parameters of type FeatureInputSingleObject

Modifier and Type	Method	Description
protected ObjectWithEllipse	CalculateEllipseLeastSquares.execute(FeatureInputSingleObject input)

Uses of FeatureInputSingleObject in org.anchoranalysis.plugin.points.calculate.ellipsoid

Methods in org.anchoranalysis.plugin.points.calculate.ellipsoid with parameters of type FeatureInputSingleObject

Modifier and Type	Method	Description
protected Ellipsoid	CalculateEllipsoidLeastSquares.execute(FeatureInputSingleObject input)

Method parameters in org.anchoranalysis.plugin.points.calculate.ellipsoid with type arguments of type FeatureInputSingleObject

Modifier and Type	Method	Description
static Ellipsoid	CalculateEllipsoidLeastSquares.of(FeatureCalculationInput<FeatureInputSingleObject> input, boolean suppressZCovariance)	Calculates an Ellipsoid for the given input.

Uses of FeatureInputSingleObject in org.anchoranalysis.test.feature.plugins.mockfeature

Fields in org.anchoranalysis.test.feature.plugins.mockfeature with type parameters of type FeatureInputSingleObject

Modifier and Type	Field	Description
static final ToDoubleFunction<FeatureInputSingleObject>	MockFeatureWithCalculationFixture.DEFAULT_FUNC_NUM_PIXELS	A default function for counting the number of pixels (voxels) in a single object.

Methods in org.anchoranalysis.test.feature.plugins.mockfeature that return types with arguments of type FeatureInputSingleObject

Modifier and Type	Method	Description
static Feature<FeatureInputSingleObject>	MockFeatureWithCalculationFixture.createMockFeatureWithCalculation()	Creates a mock feature that counts the number of pixels in an object.