Uses of Class
org.anchoranalysis.image.bean.provider.ObjectCollectionProviderUnary

Packages that use ObjectCollectionProviderUnary

Package	Description
org.anchoranalysis.plugin.image.bean.object.provider	Implementations of ObjectCollectionProvider.
org.anchoranalysis.plugin.image.bean.object.provider.connected	Implementations of ObjectCollectionProvider involving connected-components.
org.anchoranalysis.plugin.image.bean.object.provider.feature	Implementations of ObjectCollectionProvider involving feature calculation.
org.anchoranalysis.plugin.image.bean.object.provider.filter	Implementations of ObjectCollectionProvider that filter objects.
org.anchoranalysis.plugin.image.bean.object.provider.mask	Implementations of ObjectCollectionProvider involving a Mask.
org.anchoranalysis.plugin.image.bean.object.provider.merge	Implementations of ObjectCollectionProvider involving merging objects together.
org.anchoranalysis.plugin.image.bean.object.provider.morphological	Implementations of ObjectCollectionProvider involving morphological operations.
org.anchoranalysis.plugin.image.bean.object.provider.segment	Implementations of ObjectCollectionProvider involving segmentation.
org.anchoranalysis.plugin.image.bean.object.provider.slice	Implementations of ObjectCollectionProvider involving z-slice processing.
org.anchoranalysis.plugin.image.bean.object.provider.split	Implementations of ObjectCollectionProvider involving splitting objects into smaller objects.
org.anchoranalysis.plugin.imagej.bean.object.provider	Implementations of ObjectCollectionProvider that call ImageJ.
org.anchoranalysis.plugin.points.bean	Beans that fit or otherwise manipulate sets of points.

Uses of ObjectCollectionProviderUnary in org.anchoranalysis.plugin.image.bean.object.provider

Subclasses of ObjectCollectionProviderUnary in org.anchoranalysis.plugin.image.bean.object.provider

Modifier and Type	Class	Description
class	AtIndex	Extract a single ObjectMask into a new collection.
class	Duplicate	Duplicates (deep copy) an object-collection.
class	Scale	Scales all the objects in the collection by a particular scale-factor.
class	UnaryWithChannelBase	Base class for ObjectCollectionProviderUnary that also requires a Channel.
class	WithContainerBase	Base class for ObjectCollectionProviderUnary that take an optional objectsContainer bean-field.
class	WithDimensionsBase	Base class for ObjectCollectionProviderUnary classes that require dimensions to be specified.
class	WithOptionalDimensionsBase	Base class for ObjectCollectionProviderUnary classes that offer an optional means to specify dimensions.

Uses of ObjectCollectionProviderUnary in org.anchoranalysis.plugin.image.bean.object.provider.connected

Subclasses of ObjectCollectionProviderUnary in org.anchoranalysis.plugin.image.bean.object.provider.connected

Modifier and Type	Class	Description
class	DecomposeIntoConnectedComponents	Ensures each object in a collection is a connected-component, decomposing it if necessary into multiple objects.
class	RejectIfNotConnected	Rejects a set of objects, if any object is not fully connected (pixels form two or more separate connected components)

Uses of ObjectCollectionProviderUnary in org.anchoranalysis.plugin.image.bean.object.provider.feature

Subclasses of ObjectCollectionProviderUnary in org.anchoranalysis.plugin.image.bean.object.provider.feature

Modifier and Type	Class	Description
class	ObjectCollectionProviderWithFeature	An abstract base class for object collection providers that use a feature evaluator.
class	ObjectWithMaximumFeature	Finds the object with the maximum feature-value from a collection.
class	ObjectWithMaximumFeatureFromEachMatchedCollection	Finds the object with the maximum feature among a group of matches for each object.
class	SortByFeature	Creates a new object-collection with objects sorted by a derived feature-value (in ascending order)

Uses of ObjectCollectionProviderUnary in org.anchoranalysis.plugin.image.bean.object.provider.filter

Subclasses of ObjectCollectionProviderUnary in org.anchoranalysis.plugin.image.bean.object.provider.filter

Modifier and Type	Class	Description
class	Filter	Filters an ObjectCollection using the specified ObjectFilter.
class	FilterByGroup	Filters an ObjectCollection by grouping objects and then applying a filter to each group.
class	IntersectsWithContainer	Returns only the objects that intersect with at least one object in the container
class	Match	Provides an ObjectCollection by matching objects using a specified ObjectMatcher.
class	NotInContainer	Filters objects to keep only those which are NOT in the container.
class	ObjectCollectionProviderFilterBase	Base class for object collection providers that apply a filter to the objects.
class	RemoveTouchingBorder	Considers all possible pairs of objects in a provider, and removes those that touch the border.

Uses of ObjectCollectionProviderUnary in org.anchoranalysis.plugin.image.bean.object.provider.mask

Subclasses of ObjectCollectionProviderUnary in org.anchoranalysis.plugin.image.bean.object.provider.mask

Modifier and Type	Class	Description
class	AndObjectsWithMasks	Reduce the size of individual objects (if neccessary, and minimally) to fit within a binary-mask.

Uses of ObjectCollectionProviderUnary in org.anchoranalysis.plugin.image.bean.object.provider.merge

Subclasses of ObjectCollectionProviderUnary in org.anchoranalysis.plugin.image.bean.object.provider.merge

Modifier and Type	Class	Description
class	MergeBase	A base class for algorithms that merge object-masks.
class	MergeGreedyToIncreaseObjectFeature	Naive greedy merge strategy when any two neighboring objects are merged if it increases a feature.
class	MergePairs	Merges objects if a pair feature value satisfies a condition.
class	MergeToIncreaseObjectFeature	Merges neighboring objects if it results in an increase in the average feature-value calculated on each single object.
class	MergeWithFeature	Base class for object-merging strategies that involve calculating a feature.
class	MergeWithOptionalDistanceConstraint	Expands MergeBase by optionally imposing a maximum-distance requirement between objects that are possibly merged.

Uses of ObjectCollectionProviderUnary in org.anchoranalysis.plugin.image.bean.object.provider.morphological

Subclasses of ObjectCollectionProviderUnary in org.anchoranalysis.plugin.image.bean.object.provider.morphological

Modifier and Type	Class	Description
class	Dilate	Dilates each object in the collection, growing bounding-boxes as necessary in relevant dimensions.
class	Erode	Erodes each object in the collection, growing bounding-boxes as necessary in relevant dimensions.
class	ObjectCollectionProviderMorphological	Base class for providers that apply morphological operations to an ObjectCollection.

Uses of ObjectCollectionProviderUnary in org.anchoranalysis.plugin.image.bean.object.provider.segment

Subclasses of ObjectCollectionProviderUnary in org.anchoranalysis.plugin.image.bean.object.provider.segment

Modifier and Type	Class	Description
class	BinarySegmentByObject	Performs a binary-segmentation using the upstream objects as masks.
class	SegmentChannelByObject	Performs segmentation of a channel using each object in the upstream collection as a mask.

Uses of ObjectCollectionProviderUnary in org.anchoranalysis.plugin.image.bean.object.provider.slice

Subclasses of ObjectCollectionProviderUnary in org.anchoranalysis.plugin.image.bean.object.provider.slice

Modifier and Type	Class	Description
class	ExtendInZ	Creates a 3D version of an object by replicating each input-object across the z-dimension to meet (3D) dimensions.
class	ExtendInZWithinContainer	Extends an object (2D/3D) as much as it can within the z-slices of a containing object
class	FlattenZ	Flattens all object-masks in the z-dimension, so it is 2D instead of 3D (like a maximum intensity projection).
class	SliceAt	Extracts a specific slice from a collection of 3D objects.

Uses of ObjectCollectionProviderUnary in org.anchoranalysis.plugin.image.bean.object.provider.split

Subclasses of ObjectCollectionProviderUnary in org.anchoranalysis.plugin.image.bean.object.provider.split

Modifier and Type	Class	Description
class	RemoveIntersectingVoxels	Considers all possible pairs of objects in a provider, and removes any intersecting pixels
class	SplitByObjects	Splits objects in a collection based on intersections with another set of objects.
class	SplitIntoSquares	Splits objects into sub-objects by cutting by an orthogonal square lattice (like a chessboard).

Uses of ObjectCollectionProviderUnary in org.anchoranalysis.plugin.imagej.bean.object.provider

Subclasses of ObjectCollectionProviderUnary in org.anchoranalysis.plugin.imagej.bean.object.provider

Modifier and Type	Class	Description
class	DrawLineAlongConvexHull	Draws a lines between successive points on the convex-hull of an object.
class	FillHoles	Fills holes in an object.

Uses of ObjectCollectionProviderUnary in org.anchoranalysis.plugin.points.bean

Subclasses of ObjectCollectionProviderUnary in org.anchoranalysis.plugin.points.bean

Modifier and Type	Class	Description
class	SplitContourAtSaddlePoints	Splits a 2D contour represented by an object-mask into several contours, splitting at "turn" points.