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Introduction

A Java (Maven) source repository on GitHub containing the main plugins for Anchor. This includes most of the image processing algorithms.

What belongs?

Modules

Module Java Package Root & Description Classes Lines‑of‑Code
anchor-plugin-annotation org.anchoranalysis.plugin.annotation
Annotating images.
36 1,989
anchor-plugin-image org.anchoranalysis.plugin.image
Image-related options.
312 13,785
anchor-plugin-imagej org.anchoranalysis.plugin.imagej
Operations that use ImageJ.
33 1,987
anchor-plugin-image-feature org.anchoranalysis.plugin.image.feature
Feature-extraction from images.
183 6,590
anchor-plugin-image-task org.anchoranalysis.plugin.image.task
Tasks related to images.
55 3,273
anchor-plugin-io org.anchoranalysis.plugin.io
Input-output operations.
144 6,665
anchor-plugin-mpp org.anchoranalysis.plugin.mpp
Operations related to marked-point-processes.
113 6,142
anchor-plugin-mpp-experiment org.anchoranalysis.plugin.mpp.experiment
Experiments related to marked-point-processes.
35 2,641
anchor-plugin-mpp-feature org.anchoranalysis.plugin.mpp.feature
Feature-extraction with marked-point-processes.
78 2,875
anchor-plugin-mpp-segment org.anchoranalysis.plugin.mpp.segment
Segmentation involving marked-point-processes.
95 5,056
anchor-plugin-opencv org.anchoranalysis.plugin.opencv
Operations that call OpenCV.
24 1,309
anchor-plugin-operator-feature org.anchoranalysis.plugin.operator.feature
Generic features working on varying input-types.
35 1,004
anchor-plugin-points org.anchoranalysis.plugin.points
Points-fitting and other geometric operations.
33 2,036
anchor-plugin-quick org.anchoranalysis.plugin.quick
Quickly specifying experiments.
28 2,087
anchor-test-experiment org.anchoranalysis.test.experiment
Test utilities depending on anchor-experiment.
4 317
anchor-test-feature-plugins org.anchoranalysis.test.feature
Helper routines for testing features.
13 494
anchor-test-mpp org.anchoranalysis.
Tests for other packages involving image IO.
- 68

Number of classes/code is as per SonarQube, June 24th, 2020. Lines-of-code excludes whitespace and comments.